Evidence map›Paper›PMID 30997667›Full record

ArticleMolecular biotechnology2019

Use of the ptxD gene as a portable selectable marker for chloroplast transformation in Chlamydomonas reinhardtii.

José M Sandoval-Vargas, Luis A Jiménez-Clemente, Karla S Macedo-Osorio, María C Oliver-Salvador, Luis C Fernández-Linares, Noé V Durán-Figueroa, Jesús A Badillo-Corona

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Article in Molecular biotechnology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

José M Sandoval-VargasInstituto Politécnico Nacional, Unidad Profesional Interdisciplinaria de Biotecnología, Av. Acueducto SN, Col. Barrio la Laguna Ticomán, 07340, Mexico City, Mexico.
Luis A Jiménez-ClementeInstituto Politécnico Nacional, Unidad Profesional Interdisciplinaria de Biotecnología, Av. Acueducto SN, Col. Barrio la Laguna Ticomán, 07340, Mexico City, Mexico.
Karla S Macedo-OsorioInstituto Politécnico Nacional, Unidad Profesional Interdisciplinaria de Biotecnología, Av. Acueducto SN, Col. Barrio la Laguna Ticomán, 07340, Mexico City, Mexico.
María C Oliver-SalvadorInstituto Politécnico Nacional, Unidad Profesional Interdisciplinaria de Biotecnología, Av. Acueducto SN, Col. Barrio la Laguna Ticomán, 07340, Mexico City, Mexico.
Luis C Fernández-LinaresInstituto Politécnico Nacional, Unidad Profesional Interdisciplinaria de Biotecnología, Av. Acueducto SN, Col. Barrio la Laguna Ticomán, 07340, Mexico City, Mexico.
Noé V Durán-FigueroaInstituto Politécnico Nacional, Unidad Profesional Interdisciplinaria de Biotecnología, Av. Acueducto SN, Col. Barrio la Laguna Ticomán, 07340, Mexico City, Mexico.
Jesús A Badillo-CoronaInstituto Politécnico Nacional, Unidad Profesional Interdisciplinaria de Biotecnología, Av. Acueducto SN, Col. Barrio la Laguna Ticomán, 07340, Mexico City, Mexico. jbadilloc@ipn.mx.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Synthetic biology and genetic engineering in algae offer an unprecedented opportunity to develop species with traits that can help solve the problems associated with food and energy supply in the 21st century. In the green alga Chlamydomonas reinhardtii, foreign genes can be expressed from the chloroplast genome for molecular farming and metabolic engineering to obtain commodities and high-value molecules. To introduce these genes, selectable markers, which rely mostly on the use of antibiotics, are needed. This has risen social concern associated with the potential risk of horizontal gene transfer across life kingdoms, which has led to a quest for antibiotic-free selectable markers. Phosphorus (P) is a scarce nutrient element that most organisms can only assimilate in its most oxidized form as phosphate (Pi); however, some organisms are able to oxidize phosphite (Phi) to Pi prior to incorporation into the central metabolism of P. As an alternative to the use of the two positive selectable makers already available for chloroplast transformation in C. reinhardtii, the aadA and the aphA-6 genes, that require the use of antibiotics, we investigated if a phosphite-based selection method could be used for the direct recovery of chloroplast transformed lines in this alga. Here we show that following bombardment with a vector carrying the ptxD gene from Pseudomonas stutzeri WM88, only cells that integrate and express the gene proliferate and form colonies using Phi as the sole P source. Our results demonstrate that a selectable marker based on the assimilation of Phi can be used for chloroplasts transformation in a biotechnologically relevant organism. The portable selectable marker we have developed is, in more than 18 years, the latest addition to the markers available for selection of chloroplast transformed cells in C. reinhardtii. The ptxD gene will contribute to the repertoire of tools available for synthetic biology and genetic engineering in the chloroplast of C. reinhardtii.

Indexed as

Algal ProteinsBacterial ProteinsChlamydomonas reinhardtiiChloroplastsGenetic EngineeringGenetic MarkersGenetic VectorsNADH, NADPH OxidoreductasesPhosphitesPhosphorusPseudomonas stutzeriSelection, GeneticTransformation, GeneticAlgal ProteinsBacterial ProteinsGenetic MarkersNADH, NADPH OxidoreductasesNAD phosphite oxidoreductasePhosphitesPhosphorusChlamydomonas reinhardtiiChloroplast transformationPhosphite assimilationptxDSelectable marker

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.