Evidence map›Paper›PMID 30996484›Full record

ArticlePlant and soil2018

Phylogenetic distribution, biogeography and the effects of land management upon bacterial non-specific Acid phosphatase Gene diversity and abundance.

Andrew L Neal, Martin Blackwell, Elsy Akkari, Cervin Guyomar, Ian Clark, Penny R Hirsch

Open access · hybridAbstract read
In one paragraph

Article in Plant and soil, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Thermotolerant class A acid phosphatase active across broad pH range and diverse substrates.Protein science : a publication of the Protein Society · 2025
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. In Silico Analyses of Extracellular Proteins ofIranian journal of pharmaceutical research : IJPR · 2022
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Soil Nutrients Drive Function and Composition ofFrontiers in microbiology · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Andrew L Neal1Department of Sustainable Agricultural Sciences, Rothamsted Research, Harpenden, Hertfordshire, AL5 2JQ UK.
Martin Blackwell2Department of Sustainable Agricultural Sciences, Rothamsted Research, North Wyke, Okehampton, Devon EX20 2SB UK.
Elsy Akkari1Department of Sustainable Agricultural Sciences, Rothamsted Research, Harpenden, Hertfordshire, AL5 2JQ UK.
Cervin Guyomar1Department of Sustainable Agricultural Sciences, Rothamsted Research, Harpenden, Hertfordshire, AL5 2JQ UK.
Ian Clark1Department of Sustainable Agricultural Sciences, Rothamsted Research, Harpenden, Hertfordshire, AL5 2JQ UK.
Penny R Hirsch1Department of Sustainable Agricultural Sciences, Rothamsted Research, Harpenden, Hertfordshire, AL5 2JQ UK.
Rothamsted Research · GB

Funding

Biotechnology and Biological Sciences Research Council BBS/E/C/000I0320
6 · The paper itself

Abstract

BACKGROUND AND

aimsBacterial Non-Specific Acid Phosphatase (NSAP) enzymes are capable of dephosphorylating diverse organic phosphoesters but are rarely studied: their distribution in natural and managed environments is poorly understood. The aim of this study was to generate new insight into the environmental distribution of NSAPs and establish their potential global relevance to cycling of organic phosphorus.

methodsWe employed bioinformatic tools to determine NSAP diversity and subcellular localization in microbial genomes; used the corresponding NSAP gene sequences to census metagenomes from diverse ecosystems; studied the effect of long-term land management upon NSAP diversity and abundance.

resultsPeriplasmic class B NSAPs are poorly represented in marine and terrestrial environments, reflecting their association with enteric and pathogenic bacteria. Periplasmic class A and outer membrane-associated class C NSAPs are cosmopolitan. NSAPs are more abundant in marine than terrestrial ecosystems and class C more abundant than class A genes, except in an acidic peat where class A genes dominate. A clear effect of land management upon gene abundance was identified.

conclusionsNSAP genes are cosmopolitan. Class C genes are more widely distributed: their association with the outer-membrane of cells gives them a clear role in the cycling of organic phosphorus, particularly in soils.

Indexed as

Acid phosphataseExoenzymesMetagenomicsPhosphatePhosphorusSoil

Identifiers

PMID30996484
PMCPMC6438641
OpenAlexW2626309898

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.