Evidence map›Paper›PMID 30996251›Full record

ArticleNature communications2019

A conserved CCM complex promotes apoptosis non-autonomously by regulating zinc homeostasis.

Eric M Chapman, Benjamin Lant, Yota Ohashi, Bin Yu, Michael Schertzberg, Christopher Go, Deepika Dogra, Janne Koskimäki, Romuald Girard, Yan Li and 5 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 35 citations in OpenAlex.

  1. Review
  2. Review
  3. bioRxiv : the preprint server for biology · 2026
    Article
  4. Article
  5. Article
  6. DAF-16/FOXO maintains genome integrity following genotoxic stress.bioRxiv : the preprint server for biology · 2025
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. KRIT1 in vascular biology and beyond.Bioscience reports · 2024
    Review
  12. Article
  13. Lysosome-related organelles contain an expansion compartment that mediates delivery of zinc transporters to promote homeostasis.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Zinc homeostasis and signaling in the roundworm C. elegans.Biochimica et biophysica acta. Molecular cell research · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 3 countries.

Eric M ChapmanDepartment of Molecular Genetics, University of Toronto, Toronto, M5S 1A8, ON, Canada.
Benjamin LantDevelopmental and Stem Cell Biology Program, Peter Gilgan Centre for Research and Learning, The Hospital for Sick Children, Toronto, M5G 0A4, ON, Canada.
Yota OhashiDepartment of Molecular Genetics, University of Toronto, Toronto, M5S 1A8, ON, Canada.
Bin YuDevelopmental and Stem Cell Biology Program, Peter Gilgan Centre for Research and Learning, The Hospital for Sick Children, Toronto, M5G 0A4, ON, Canada.
Michael SchertzbergThe Donnelly Centre for Cellular and Biomolecular Research, University of Toronto, Toronto, M5S 3E1, ON, Canada.
Christopher GoDepartment of Molecular Genetics, University of Toronto, Toronto, M5S 1A8, ON, Canada.
Deepika DograInstitute for Biochemistry and Biology, Potsdam University, Potsdam, 14476, Germany.
Janne KoskimäkiNeurovascular Surgery Program, Section of Neurosurgery, The University of Chicago Medicine, Chicago, IL, 60637, USA.
Romuald GirardNeurovascular Surgery Program, Section of Neurosurgery, The University of Chicago Medicine, Chicago, IL, 60637, USA.
Yan LiUniversity of Chicago Center for Research Informatics, The University of Chicago, Chicago, IL, 60637, USA.ORCID http://orcid.org/0000-0002-9481-8086
Andrew G FraserDepartment of Molecular Genetics, University of Toronto, Toronto, M5S 1A8, ON, Canada.
Issam A AwadNeurovascular Surgery Program, Section of Neurosurgery, The University of Chicago Medicine, Chicago, IL, 60637, USA.
Salim Abdelilah-SeyfriedInstitute for Biochemistry and Biology, Potsdam University, Potsdam, 14476, Germany.ORCID http://orcid.org/0000-0003-3183-3841
Anne-Claude GingrasDepartment of Molecular Genetics, University of Toronto, Toronto, M5S 1A8, ON, Canada.ORCID http://orcid.org/0000-0002-6090-4437
W Brent DerryDepartment of Molecular Genetics, University of Toronto, Toronto, M5S 1A8, ON, Canada. brent.derry@sickkids.ca.ORCID http://orcid.org/0000-0002-1977-8475
University of Toronto · CAUniversity of Chicago · USHospital for Sick Children · CAMount Sinai Hospital · CAUniversity of Potsdam · DE

Funding

Somatic mutation(s) and cellular changes in CCM pathogenesisP01NS092521 · NINDS · DUKE UNIVERSITY · PI MARCHUK, DOUGLAS A. · 2015 to 2024
$12.9M
NINDS NIH HHS P01 NS092521
6 · The paper itself

Abstract

Apoptotic death of cells damaged by genotoxic stress requires regulatory input from surrounding tissues. The C. elegans scaffold protein KRI-1, ortholog of mammalian KRIT1/CCM1, permits DNA damage-induced apoptosis of cells in the germline by an unknown cell non-autonomous mechanism. We reveal that KRI-1 exists in a complex with CCM-2 in the intestine to negatively regulate the ERK-5/MAPK pathway. This allows the KLF-3 transcription factor to facilitate expression of the SLC39 zinc transporter gene zipt-2.3, which functions to sequester zinc in the intestine. Ablation of KRI-1 results in reduced zinc sequestration in the intestine, inhibition of IR-induced MPK-1/ERK1 activation, and apoptosis in the germline. Zinc localization is also perturbed in the vasculature of krit1

Indexed as

AnimalsAnimals, Genetically ModifiedApoptosisApoptosis Regulatory ProteinsBrainCaenorhabditis elegansCaenorhabditis elegans ProteinsCation Transport ProteinsDisease Models, AnimalGene Expression ProfilingHemangioma, Cavernous, Central Nervous SystemHumansIntracellular Signaling Peptides and ProteinsKRIT1 ProteinKruppel-Like Transcription FactorsMAP Kinase Signaling SystemApoptosis Regulatory ProteinsCaenorhabditis elegans ProteinsCation Transport ProteinsIntracellular Signaling Peptides and ProteinsKLF-3 protein, C elegansKRI-1 protein, C elegansKRIT1 ProteinKrit1 protein, mousekrit1 protein, zebrafishKruppel-Like Transcription FactorsMitogen-Activated Protein Kinase 1Mitogen-Activated Protein Kinase 7mpk-1 protein, C elegansMuscle ProteinsZebrafish ProteinsZinc

Identifiers

PMID30996251
PMCPMC6470173
OpenAlexW2939330740

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.