Evidence map›Paper›PMID 30996079›Full record

ArticleScience translational medicine2019

Resistance to neoadjuvant chemotherapy in triple-negative breast cancer mediated by a reversible drug-tolerant state.

Gloria V Echeverria, Zhongqi Ge, Sahil Seth, Xiaomei Zhang, Sabrina Jeter-Jones, Xinhui Zhou, Shirong Cai, Yizheng Tu, Aaron McCoy, Michael Peoples and 20 more

Abstract read
In one paragraph

Article in Science translational medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 200 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
200citing papers in PubMed, 3 pooled it
26.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

200 citing papers in PubMed, 3 syntheses or guidelines pooled it, 300 citations in OpenAlex.

  1. Pooled it
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  16. Review
  17. Game of clones: decipher lineage plasticity in hormone-driven cancers.Cellular and molecular life sciences : CMLS · 2026
    Review
  18. Profile of Helen M. Piwnica-Worms.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  19. Metabolic Response to CDK4/6 Inhibition in ER+ Breast Cancer Creates a Therapeutic Vulnerability in Drug-Tolerant Persister Cells.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Article
  20. Article

140 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

30 authors at 3 institutions in 1 country.

Gloria V EcheverriaDepartment of Experimental Radiation Oncology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.ORCID 0000-0002-3772-9298
Zhongqi GeDepartment of Experimental Radiation Oncology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Sahil SethDepartment of Genomic Medicine, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.ORCID 0000-0003-4579-3959
Xiaomei ZhangDepartment of Experimental Radiation Oncology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Sabrina Jeter-JonesDepartment of Experimental Radiation Oncology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.ORCID 0000-0002-9254-4499
Xinhui ZhouDepartment of Experimental Radiation Oncology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Shirong CaiDepartment of Experimental Radiation Oncology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Yizheng TuDepartment of Experimental Radiation Oncology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Aaron McCoyDepartment of Experimental Radiation Oncology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Michael PeoplesInstitute for Applied Cancer Science, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.ORCID 0000-0001-5233-2603
Yuting SunInstitute for Applied Cancer Science, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Huan QiuDepartment of Integrative Biology and Pharmacology, University of Texas Health Science Center, Houston, TX 77030, USA.
Qing ChangInstitute for Applied Cancer Science, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Christopher BristowInstitute for Applied Cancer Science, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Alessandro CarugoInstitute for Applied Cancer Science, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Jiansu ShaoDepartment of Experimental Radiation Oncology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Xiaoyan MaInstitute for Applied Cancer Science, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Angela HarrisInstitute for Applied Cancer Science, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.ORCID 0000-0003-2623-4713
Prabhjot MundiDepartment of Systems Biology, Columbia University Medical Center, New York, NY 10032, USA.
Rosanna LauDepartment of Pathology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.ORCID 0000-0003-1948-7480
Vandhana RamamoorthyInstitute for Applied Cancer Science, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Yun WuDepartment of Pathology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Mariano J AlvarezDepartment of Systems Biology, Columbia University Medical Center, New York, NY 10032, USA.ORCID 0000-0002-7503-2491
Andrea CalifanoDepartment of Systems Biology, Columbia University Medical Center, New York, NY 10032, USA.
Stacy L MoulderDepartment of Breast Medical Oncology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
William F SymmansDepartment of Pathology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.ORCID 0000-0002-1526-184X
Joseph R MarszalekInstitute for Applied Cancer Science, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.ORCID 0000-0003-2320-3209
Timothy P HeffernanInstitute for Applied Cancer Science, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.ORCID 0000-0002-3166-8922
Jeffrey T ChangDepartment of Bioinformatics and Computational Biology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Helen Piwnica-WormsDepartment of Experimental Radiation Oncology, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA. hpiwnica-worms@mdanderson.org.ORCID 0000-0003-4210-6738
The University of Texas MD Anderson Cancer Center · USColumbia University Irving Medical Center · USThe University of Texas Health Science Center at Houston · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
Tumor Biology and Microenvironment ProgramP30CA013696 · NCI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI Parisa Tehranifar · 1985 to 2026
$115.3M
Translational Research in Breast Cancer (SPORE)P50CA186784 · NCI · BAYLOR COLLEGE OF MEDICINE · PI Xiang Zhang · 2014 to 2026
$24.5M
Predicting Cancer Cell Response to Endogenous and Exogenous Perturbations at the Single Cell LevelR35CA197745 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ANDREA CALIFANO · 2015 to 2026
$11.5M
Project 2: Targeting Cooperative Phenotypes Common in Spatial HeterogeneityU54CA209978 · NCI · UNIVERSITY OF UTAH · PI CHANG, JEFFREY T · 2017 to 2021
$10.5M
Systematic Identification and Pharmacological Targeting of Tumor Dependencies for Precision Cancer MedicineU01CA217858 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CALIFANO, ANDREA · 2017 to 2021
$6.1M
High-performance compute cluster for biomedical computingS10OD012351 · OD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CALIFANO, ANDREA · 2012 to 2012
$2.0M
Storage System for High Performance ComputingS10OD021764 · OD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CALIFANO, ANDREA · 2016 to 2016
$600k
NCI NIH HHS P30 CA013696NCI NIH HHS P30 CA016672NCI NIH HHS P50 CA186784NCI NIH HHS R35 CA197745NCI NIH HHS U01 CA217858NCI NIH HHS U54 CA209978NIH HHS S10 OD012351NIH HHS S10 OD021764
6 · The paper itself

Abstract

Eradicating triple-negative breast cancer (TNBC) resistant to neoadjuvant chemotherapy (NACT) is a critical unmet clinical need. In this study, patient-derived xenograft (PDX) models of treatment-naïve TNBC and serial biopsies from TNBC patients undergoing NACT were used to elucidate mechanisms of chemoresistance in the neoadjuvant setting. Barcode-mediated clonal tracking and genomic sequencing of PDX tumors revealed that residual tumors remaining after treatment with standard frontline chemotherapies, doxorubicin (Adriamycin) combined with cyclophosphamide (AC), maintained the subclonal architecture of untreated tumors, yet their transcriptomes, proteomes, and histologic features were distinct from those of untreated tumors. Once treatment was halted, residual tumors gave rise to AC-sensitive tumors with similar transcriptomes, proteomes, and histological features to those of untreated tumors. Together, these results demonstrated that tumors can adopt a reversible drug-tolerant state that does not involve clonal selection as an AC resistance mechanism. Serial biopsies obtained from patients with TNBC undergoing NACT revealed similar histologic changes and maintenance of stable subclonal architecture, demonstrating that AC-treated PDXs capture molecular features characteristic of human TNBC chemoresistance. Last, pharmacologic inhibition of oxidative phosphorylation using an inhibitor currently in phase 1 clinical development delayed residual tumor regrowth. Thus, AC resistance in treatment-naïve TNBC can be mediated by nonselective mechanisms that confer a reversible chemotherapy-tolerant state with targetable vulnerabilities.

Indexed as

AnimalsCell Line, TumorCyclophosphamideDoxorubicinDrug Resistance, NeoplasmFemaleHumansMice, SCIDNeoadjuvant TherapyTranscriptomeTriple Negative Breast NeoplasmsXenograft Model Antitumor AssaysCyclophosphamideDoxorubicin

Identifiers

PMID30996079
PMCPMC6541393
OpenAlexW2936989468

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.