Evidence map›Paper›PMID 30995842›Full record

ArticleACS synthetic biology2019

Genetic Incorporation of Noncanonical Amino Acids Using Two Mutually Orthogonal Quadruplet Codons.

Erome Daniel Hankore, Linyi Zhang, Yan Chen, Kun Liu, Wei Niu, Jiantao Guo

Open access · greenAbstract read
In one paragraph

Article in ACS synthetic biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 40 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Recent advances in the expanding genetic code.Current opinion in chemical biology · 2024
    Review
  5. Review
  6. Review
  7. Review
  8. Review
  9. Tuning tRNAs for improved translation.Frontiers in genetics · 2024
    Review
  10. Review
  11. Review
  12. Article
  13. Genetic Code Expansion in Mammalian Cells Through Quadruplet Codon Decoding.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  14. Genetic Code Expansion inACS synthetic biology · 2022
    Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Erome Daniel HankoreDepartment of Chemistry , University of Nebraska-Lincoln , Lincoln , Nebraska 68588 , United States.
Linyi ZhangDepartment of Chemistry , University of Nebraska-Lincoln , Lincoln , Nebraska 68588 , United States.
Yan ChenDepartment of Chemistry , University of Nebraska-Lincoln , Lincoln , Nebraska 68588 , United States.
Kun LiuDepartment of Chemistry , University of Nebraska-Lincoln , Lincoln , Nebraska 68588 , United States.
Wei NiuDepartment of Chemical & Biomolecular Engineering , University of Nebraska-Lincoln , Lincoln , Nebraska 68588 , United States.
Jiantao GuoDepartment of Chemistry , University of Nebraska-Lincoln , Lincoln , Nebraska 68588 , United States.ORCID 0000-0001-6983-9953
University of Nebraska–Lincoln · US

Funding

Improve the safety of an efficacious live-attenuated HIV-1 vaccine through unnatuR01AI111862 · NIAID · UNIVERSITY OF NEBRASKA LINCOLN · PI GUO, JIANTAO, LI, QINGSHENG · 2014 to 2017
$1.9M
NIAID NIH HHS R01 AI111862
6 · The paper itself

Abstract

Genetic incorporation of noncanonical amino acids has emerged as a powerful tool for the study of protein structure and function. While the three triplet nonsense codons have been widely explored, quadruplet codons have attracted attention for the potential of creating additional blank codons for noncanonical amino acid mutagenesis. Here we demonstrated for the first time that two orthogonal quadruplet codons could be used to simultaneously encode two different noncanonical amino acids within a single protein in bacterial cells. To achieve this, we fine-tuned the interaction between aminoacyl-tRNA synthetase and tRNA, which afforded up to 21-fold improvement in quadruplet codon decoding efficiency. This work represents a significant step toward the use of multiple quadruplet codons for noncanonical amino acid mutagenesis. Simultaneous incorporation of two or more noncanonical amino acids is of significant importance for biological applications that can benefit from multiple unique functional groups, such as fluorescence resonance energy transfer and nuclear magnetic resonance studies, and ultimately for the synthesis of completely unnatural biopolymers as new biomaterials.

Indexed as

Genetic CodeAmino AcidsAmino Acyl-tRNA SynthetasesMutagenesisRecombinant Fusion ProteinsRNA, TransferAmino AcidsAmino Acyl-tRNA SynthetasesRecombinant Fusion ProteinsRNA, Transferfour-base codongenetic codeorthogonal codonquadruplet codonunnatural amino acids

Identifiers

PMID30995842
PMCPMC6525065
OpenAlexW2936502125

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.