Evidence map›Paper›PMID 30995485›Full record

ArticleCell reports2019

Essential Roles of Tbr1 in the Formation and Maintenance of the Orientation-Selective J-RGCs and a Group of OFF-Sustained RGCs in Mouse.

Takae Kiyama, Ye Long, Ching-Kang Chen, Christopher M Whitaker, Allison Shay, Hongyu Wu, Tudor C Badea, Amir Mohsenin, Jan Parker-Thornburg, William H Klein and 3 more

Abstract read
In one paragraph

Article in Cell reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Characterization of Tbr2-expressing retinal ganglion cells.The Journal of comparative neurology · 2021
    Article
  13. Genetic control of retinal ganglion cell genesis.Cellular and molecular life sciences : CMLS · 2021
    Review
  14. Wiring the Binocular Visual Pathways.International journal of molecular sciences · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Takae KiyamaRuiz Department of Ophthalmology and Visual Science, McGovern Medical School at The University of Texas Health Science Center at Houston (UTHealth), Houston, TX 77030, USA.
Ye LongRuiz Department of Ophthalmology and Visual Science, McGovern Medical School at The University of Texas Health Science Center at Houston (UTHealth), Houston, TX 77030, USA.
Ching-Kang ChenDepartment of Ophthalmology, Baylor College of Medicine, Houston, TX 77030, USA.
Christopher M WhitakerRuiz Department of Ophthalmology and Visual Science, McGovern Medical School at The University of Texas Health Science Center at Houston (UTHealth), Houston, TX 77030, USA.
Allison ShayDepartment of Ophthalmology, Baylor College of Medicine, Houston, TX 77030, USA.
Hongyu WuRuiz Department of Ophthalmology and Visual Science, McGovern Medical School at The University of Texas Health Science Center at Houston (UTHealth), Houston, TX 77030, USA.
Tudor C BadeaNational Eye Institute, NIH, Bethesda, MD 20892, USA.
Amir MohseninRuiz Department of Ophthalmology and Visual Science, McGovern Medical School at The University of Texas Health Science Center at Houston (UTHealth), Houston, TX 77030, USA; Robert Cizik Eye Clinic, Houston, TX 77030, USA.
Jan Parker-ThornburgDepartment of Genetics, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
William H KleinDepartment of Systems Biology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Stephen L MillsRuiz Department of Ophthalmology and Visual Science, McGovern Medical School at The University of Texas Health Science Center at Houston (UTHealth), Houston, TX 77030, USA.
Stephen C MasseyRuiz Department of Ophthalmology and Visual Science, McGovern Medical School at The University of Texas Health Science Center at Houston (UTHealth), Houston, TX 77030, USA.
Chai-An MaoRuiz Department of Ophthalmology and Visual Science, McGovern Medical School at The University of Texas Health Science Center at Houston (UTHealth), Houston, TX 77030, USA. Electronic address: chai-an.mao@uth.tmc.edu.

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Fabien Delerue · 1985 to 2026
$290.8M
Retinal Circuit Development & GeneticsZIAEY000504 · NEI · NATIONAL EYE INSTITUTE · PI BADEA, TUDOR · 2011 to 2021
$15.6M
VISION RESEARCH CENTERP30EY002520 · NEI · BAYLOR COLLEGE OF MEDICINE · PI Samuel M Wu · 1985 to 2026
$14.8M
NEUROTRANSMITTER MECHANISMS IN THE RETINAR01EY006515 · NEI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI MASSEY, STEPHEN C · 1985 to 2017
$7.0M
Optic nerve regeneration: gene networks in retina developmentR01EY011930 · NEI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI KLEIN, WILLIAM H. · 1997 to 2016
$5.3M
RECOVERY OF PHOTOTRANSDUCTIONR01EY013811 · NEI · VIRGINIA COMMONWEALTH UNIVERSITY · PI CHEN, CHING-KANG JASON · 2002 to 2017
$5.2M
CONNECTIVITY PATTERNS OF RETINAL BIPOLAR CELLSR01EY010121 · NEI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI MASSEY, STEPHEN C · 1999 to 2018
$4.6M
The role of T-box transcriptional regulator Tbr2 in the development of ipRGCsR01EY024376 · NEI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI MAO, CHAI-AN · 2015 to 2024
$3.9M
UTHouston Core Center for Vision ResearchP30EY028102 · NEI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI DRAGOI, VALENTIN · 2017 to 2021
$3.1M
Rod/cone gap junctions initiate an irradiance pathwayR01EY029408 · NEI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI MASSEY, STEPHEN C, RIBELAYGA, CHRISTOPHE P. · 2018 to 2022
$2.9M
Instituting innovative CRISPR/Cas9 technology at an NCI Comprehensive Cancer Center transgenic facilityR50CA211121 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI PARKER-THORNBURG, JAN · 2017 to 2021
$1.2M
Mechanisms, functions and utility of RGC oscillation in retinal deafferentation mouse modelsR01EY026930 · NEI · BAYLOR COLLEGE OF MEDICINE · PI CHEN, CHING-KANG JASON, WU, SAMUEL M · 2017 to 2019
$1.2M
NCI NIH HHS P30 CA016672NCI NIH HHS R50 CA211121NEI NIH HHS F32 EY021958NEI NIH HHS P30 EY002520NEI NIH HHS P30 EY028102NEI NIH HHS R01 EY006515NEI NIH HHS R01 EY010121NEI NIH HHS R01 EY011930NEI NIH HHS R01 EY013811NEI NIH HHS R01 EY024376NEI NIH HHS R01 EY026930NEI NIH HHS R01 EY029408NEI NIH HHS R56 EY013811
6 · The paper itself

Abstract

In the mouse retina, more than 30 retinal ganglion cell (RGC) subtypes have been classified based on a combined metric of morphological and functional characteristics. RGCs arise from a common pool of retinal progenitor cells during embryonic stages and differentiate into mature subtypes in adult retinas. However, the cellular and molecular mechanisms controlling formation and maturation of such remarkable cellular diversity remain unknown. Here, we demonstrate that T-box transcription factor T-brain 1 (Tbr1) is expressed in two groups of morphologically and functionally distinct RGCs: the orientation-selective J-RGCs and a group of OFF-sustained RGCs with symmetrical dendritic arbors. When Tbr1 is genetically ablated during retinal development, these two RGC groups cannot develop. Ectopically expressing Tbr1 in M4 ipRGCs during development alters dendritic branching and density but not the inner plexiform layer stratification level. Our data indicate that Tbr1 plays critical roles in regulating the formation and dendritic morphogenesis of specific RGC types.

Indexed as

Action PotentialsAnimalsAxonsCell Adhesion MoleculesCholera ToxinDendritesEmbryo, MammalianJunctional Adhesion Molecule BMiceMice, TransgenicPatch-Clamp TechniquesPotassiumRetinaRetinal Ganglion CellsT-Box Domain ProteinsCell Adhesion MoleculesCholera ToxinJam2 protein, mouseJunctional Adhesion Molecule BPotassiumT-Box Domain ProteinsTbr1 protein, mousedendritic branchingdendritic morphogenesisJam2J-RGCOFF RGCOFF-sustained RGCRGC developmentRGC subtypeTbr1

Identifiers

PMID30995485
PMCPMC6542366

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.