Evidence map›Paper›PMID 30994454›Full record

ArticleeLife2019

Mutant huntingtin impairs PNKP and ATXN3, disrupting DNA repair and transcription.

Rui Gao, Anirban Chakraborty, Charlene Geater, Subrata Pradhan, Kara L Gordon, Jeffrey Snowden, Subo Yuan, Audrey S Dickey, Sanjeev Choudhary, Tetsuo Ashizawa and 5 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed, 1 pooled it
7.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 1 synthesis or guideline pooled it, 127 citations in OpenAlex.

  1. Pooled it
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  18. mEMBO reports · 2024
    Article
  19. Poly ADP-ribose signaling is dysregulated in Huntington disease.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  20. Review

19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 1 country.

Rui GaoDepartment of Neurology, University of Texas Medical Branch, Galveston, United States.
Anirban ChakrabortyDepartment of Internal Medicine, University of Texas Medical Branch, Galveston, United States.
Charlene GeaterDepartment of Psychiatry and Human Behavior and the Sue and Bill Gross Stem Cell Center, University of California, Irvine, Irvine, United States.
Subrata PradhanDepartment of Neurology, University of Texas Medical Branch, Galveston, United States.
Kara L GordonDepartment of Neurology, Duke University School of Medicine, Durham, United States.
Jeffrey SnowdenDepartment of Neurology, University of Texas Medical Branch, Galveston, United States.
Subo YuanDepartment of Neuroscience, Cell Biology and Anatomy, University of Texas Medical Branch, Galveston, United States.
Audrey S DickeyDepartment of Neurology, Duke University School of Medicine, Durham, United States.
Sanjeev ChoudharyDepartment of Biochemistry, Cell Biology and Genetics, Sam Houston State University, Huntsville, United States.ORCID 0000-0001-8290-7420
Tetsuo AshizawaDepartment of Neurology, Houston Methodist Research Institute, Houston, United States.
Lisa M EllerbyBuck Institute for Research on Aging, Novato, United States.
Albert R La SpadaDepartment of Neurology, Duke University School of Medicine, Durham, United States.ORCID 0000-0001-6151-2964
Leslie M ThompsonDepartment of Psychiatry and Human Behavior and the Sue and Bill Gross Stem Cell Center, University of California, Irvine, Irvine, United States.
Tapas K HazraDepartment of Internal Medicine, University of Texas Medical Branch, Galveston, United States.
Partha S SarkarDepartment of Neurology, University of Texas Medical Branch, Galveston, United States.ORCID 0000-0002-2885-8100
The University of Texas Medical Branch at Galveston · USDuke University · USUniversity of California, Irvine · USBuck Institute for Research on Aging · USHouston Methodist · USSam Houston State University · US

Funding

Identifying Factors Regulating Medium Spiny Neuron Differentiation or Maintenance as Therapeutic Targets for Huntington's Disease using Induced Pluripotent Stem CellsR01NS100529 · NINDS · BUCK INSTITUTE FOR RESEARCH ON AGING · PI Lisa M Ellerby · 2016 to 2026
$5.6M
Epigenetic Pathology and Therapy in Huntington's DiseaseR01NS089076 · NINDS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI FRAENKEL, ERNEST, HOUSMAN, DAVID · 2015 to 2024
$4.9M
The PPAR-delta pathway in neural function and Huntington's disease neuropathologyR01NS065874 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LA SPADA, ALBERT R · 2010 to 2020
$4.0M
Molecular genetic regulation of autophagy in health and neurodegenerative diseaseR01AG033082 · NIA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LA SPADA, ALBERT R · 2009 to 2019
$4.0M
MAP4K3 regulation of cellular stress response pathways in health and diseaseRF1AG033082 · NIA · UNIVERSITY OF CALIFORNIA-IRVINE · PI LA SPADA, ALBERT R · 2022 to 2025
$3.3M
Preferential single-strand break repair in the active genes of mammalian cellsR01NS073976 · NINDS · UNIVERSITY OF TEXAS MED BR GALVESTON · PI HAZRA, TAPAS K · 2012 to 2021
$3.3M
Neuroregulatory Mechanisms of PIAS1 and Implications for Huntington's DiseaseR01NS090390 · NINDS · UNIVERSITY OF CALIFORNIA-IRVINE · PI DAVIDSON, BEVERLY L., THOMPSON, LESLIE MICHELS · 2015 to 2018
$1.8M
Pathogenic Role of DNA-Damage Response Pathway in the Diabetic RetinaR01EY026089 · NEI · UNIVERSITY OF TEXAS MED BR GALVESTON · PI SARKAR, PARTHA S · 2016 to 2019
$1.4M
Neuroregulatory Mechanisms of PIAS1 and Implications for Huntington's DiseaseR56NS090390 · NINDS · UNIVERSITY OF CALIFORNIA-IRVINE · PI THOMPSON, LESLIE MICHELS · 2014 to 2014
$565k
DNA double strand break repair deficiency and neurodegenerationR56NS073976 · NINDS · UNIVERSITY OF TEXAS MED BR GALVESTON · PI HAZRA, TAPAS K · 2024 to 2024
$536k
Hereditary Disease Foundation Postdoctoral FellowshipMitchel Center for Neurodegenerative Diseases, University of Texas Medical Branch Intramural Developmental GrantMitchel Center for Neurodegenerative Diseases, University of Texas Medical Branch, Galveston, TX Developmental GrantNEI NIH HHS R01 EY026089NIA NIH HHS R01 AG033082NIA NIH HHS RF1 AG033082NIH Office of the Director AG033082NIH Office of the Director EY026089-01A1NIH Office of the Director NS065874NIH Office of the Director NS073976NIH Office of the Director NS089076NIH Office of the Director NS090390NIH Office of the Director NS100529NIH Office of the Director NSO79541-01NINDS NIH HHS R01 NS065874NINDS NIH HHS R01 NS073976NINDS NIH HHS R01 NS089076NINDS NIH HHS R01 NS090390NINDS NIH HHS R01 NS100529NINDS NIH HHS R56 NS073976NINDS NIH HHS R56 NS090390
6 · The paper itself

Abstract

How huntingtin (HTT) triggers neurotoxicity in Huntington's disease (HD) remains unclear. We report that HTT forms a transcription-coupled DNA repair (TCR) complex with RNA polymerase II subunit A (POLR2A), ataxin-3, the DNA repair enzyme polynucleotide-kinase-3'-phosphatase (PNKP), and cyclic AMP-response element-binding (CREB) protein (CBP). This complex senses and facilitates DNA damage repair during transcriptional elongation, but its functional integrity is impaired by mutant HTT. Abrogated PNKP activity results in persistent DNA break accumulation, preferentially in actively transcribed genes, and aberrant activation of DNA damage-response ataxia telangiectasia-mutated (ATM) signaling in HD transgenic mouse and cell models. A concomitant decrease in Ataxin-3 activity facilitates CBP ubiquitination and degradation, adversely impacting transcription and DNA repair. Increasing PNKP activity in mutant cells improves genome integrity and cell survival. These findings suggest a potential molecular mechanism of how mutant HTT activates DNA damage-response pro-degenerative pathways and impairs transcription, triggering neurotoxicity and functional decline in HD.

Indexed as

DNA RepairTranscription, GeneticAnimalsAtaxin-3Cell LineDNA-Directed RNA PolymerasesDNA Repair EnzymesHumansHuntingtin ProteinMice, TransgenicMutant ProteinsPeptide FragmentsPhosphotransferases (Alcohol Group Acceptor)Protein BindingProtein MultimerizationRepressor ProteinsAtaxin-3ATXN3 protein, humanbone sialoprotein (35-62), humanDNA-Directed RNA PolymerasesDNA Repair EnzymesHTT protein, humanHuntingtin ProteinMutant ProteinsPeptide FragmentsPhosphotransferases (Alcohol Group Acceptor)PNKP protein, humanPOLR2A RNA polymerase, humanRepressor ProteinsSialoglycoproteinsDNA damageDNA damage responseHuntington's diseasemouseneurosciencepolyglutamineTranscription-Coupled DNA Repair

Identifiers

PMID30994454
PMCPMC6529219
OpenAlexW2936437073

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.