Evidence map›Paper›PMID 30994353›Full record

ArticleJournal of proteome research2019

Quantitative Interrogation of the Human Kinome Perturbed by Two BRAF Inhibitors.

Weili Miao, Yinsheng Wang

Open access · greenAbstract read
In one paragraph

Article in Journal of proteome research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Weili MiaoDepartment of Chemistry , University of California , Riverside , California 92521-0403 , United States.
Yinsheng WangDepartment of Chemistry , University of California , Riverside , California 92521-0403 , United States.ORCID 0000-0001-5565-283X
University of California, Riverside · US

Funding

Quantitative Adductomics Approaches for Assessing the Occurrence and Repair of DNA AdductsR01CA210072 · NCI · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI WANG, YINSHENG · 2017 to 2021
$1.8M
NCI NIH HHS R01 CA210072
6 · The paper itself

Abstract

Oncogenic BRAF mutations contribute to the development of a number of cancers, and small-molecule BRAF inhibitors have been approved by the Food and Drug Administration (FDA) for anticancer therapy. In this study, we employed two targeted quantitative proteomics approaches for monitoring separately the alterations in protein expression and ATP binding affinities of kinases in cultured human melanoma cells elicited by two FDA-approved small-molecule BRAF inhibitors, dabrafenib and vemurafenib. Our results showed that treatment with the two inhibitors led to markedly different reprograming of the human kinome. Furthermore, we confirmed that vemurafenib could compromise the ATP binding capacity of MAP2K5 in vitro and inhibit its kinase activity in cells. Together, our targeted quantitative proteomic methods revealed profound changes in expression levels of kinase proteins in cultured melanoma cells upon treatment with clinically used BRAF inhibitors and led to the discovery of novel putative target kinases for these inhibitors.

Indexed as

Antineoplastic Combined Chemotherapy ProtocolsCell Line, TumorDrug Resistance, NeoplasmGenome, HumanHumansImidazolesMAP Kinase Kinase 5MelanomaMutationOximesPhosphotransferasesProtein Kinase InhibitorsProteomicsProto-Oncogene Proteins B-rafVemurafenibBRAF protein, humandabrafenibImidazolesMAP Kinase Kinase 5OximesPhosphotransferasesProtein Kinase InhibitorsProto-Oncogene Proteins B-rafVemurafenibBRAFkinasekinase inhibitorskinomemelanomamultiple-reaction monitoringparallel-reaction monitoringquantitative proteomicsSILACtargeted proteomics

Identifiers

PMID30994353
PMCPMC6939617
OpenAlexW2938809206

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.