Evidence map›Paper›PMID 30994334›Full record

ArticleBiochemistry2019

An Intermediate Conformational State of Cytochrome P450cam-CN in Complex with Putidaredoxin.

Shih-Wei Chuo, Lee-Ping Wang, R David Britt, David B Goodin

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Shih-Wei ChuoDepartment of Chemistry , University of California, Davis , One Shields Avenue , Davis , California 95616 , United States.
Lee-Ping WangDepartment of Chemistry , University of California, Davis , One Shields Avenue , Davis , California 95616 , United States.ORCID 0000-0003-3072-9946
R David BrittDepartment of Chemistry , University of California, Davis , One Shields Avenue , Davis , California 95616 , United States.ORCID 0000-0003-0889-8436
David B GoodinDepartment of Chemistry , University of California, Davis , One Shields Avenue , Davis , California 95616 , United States.ORCID 0000-0002-9196-0001
University of California, Davis · US

Funding

Supplement:Spectroscopy Investigations of Metalloenzyme MechanismsR35GM126961 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI R. David Britt · 2018 to 2026
$3.7M
NOVEL SUBSTRATE OXIDATION BY ENZYME ENGINEERINGR01GM041049 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI GOODIN, DAVID B. · 1994 to 2014
$3.6M
Supplement: Exploring the biology of O-acetyl sialic acids using stable synthetic mimicsR01AI130684 · NIAID · UNIVERSITY OF CALIFORNIA AT DAVIS · PI CHEN, XI, VARKI, AJIT P · 2017 to 2020
$2.3M
Novel Substrate Oxidation by Enzyme EngineeringR37GM041049 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI GOODIN, DAVID B. · 2006 to 2010
$2.1M
NIAID NIH HHS R01 AI130684NIGMS NIH HHS R01 GM041049NIGMS NIH HHS R35 GM126961NIGMS NIH HHS R37 GM041049
6 · The paper itself

Abstract

Cytochrome P450cam is an archetypal example of the vast family of heme monooxygenases and serves as a model for an enzyme that is highly specific for both its substrate and reductase. During catalysis, it undergoes significant conformational changes of the F and G helices upon binding its substrate and redox partner, putidaredoxin (Pdx). Recent studies have shown that Pdx binding to the closed camphor-bound form of ferric P450cam results in its conversion to a fully open state. However, during catalytic turnover, it remains unclear whether this same conformational change also occurs or whether it is coupled to the formation of the critical compound I intermediate. Here, we have examined P450cam bound simultaneously by camphor, CN

Indexed as

Molecular Dynamics SimulationProtein ConformationBacterial ProteinsBinding SitesBiocatalysisCamphor 5-MonooxygenaseCatalytic DomainFerredoxinsOxidation-ReductionProtein BindingPseudomonas putidaSubstrate SpecificityBacterial ProteinsCamphor 5-MonooxygenaseFerredoxinsputidaredoxin

Identifiers

PMID30994334
PMCPMC7185884
OpenAlexW2938151217

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.