Evidence map›Paper›PMID 30993743›Full record

ArticleJournal of clinical laboratory analysis2019

Family-based Association between Allele T of rs4646536 in CYP27B1 and vitamin D deficiency.

Songcheng Yu, Xing Li, Yan Wang, Zhenxing Mao, Yuanchen Xie, Lin Zhang, Chongjian Wang, Wenjie Li

Open access · goldAbstract read
In one paragraph

Article in Journal of clinical laboratory analysis, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 9 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Association between single nucleotide polymorphisms in vitamin D related and parathyroid hormone genes with nonsyndromic oral cleft.Journal of orofacial orthopedics = Fortschritte der Kieferorthopadie : Organ/official journal Deutsche Gesellschaft fur Kieferorthopadie · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Songcheng YuCollege of Public Health, Zhengzhou University, Zhengzhou, China.
Xing LiCollege of Public Health, Zhengzhou University, Zhengzhou, China.
Yan WangCollege of Public Health, Zhengzhou University, Zhengzhou, China.
Zhenxing MaoCollege of Public Health, Zhengzhou University, Zhengzhou, China.
Yuanchen XieCollege of Public Health, Zhengzhou University, Zhengzhou, China.
Lin ZhangCollege of Public Health, Zhengzhou University, Zhengzhou, China.
Chongjian WangCollege of Public Health, Zhengzhou University, Zhengzhou, China.
Wenjie LiCollege of Public Health, Zhengzhou University, Zhengzhou, China.ORCID https://orcid.org/0000-0002-1768-1178
Zhengzhou University · CN

Funding

National Key Research and Development Program "Precision Medicine Initiative" of China 2016YFC0900803National Natural Science Foundation of China 81573151National Natural Science Foundation of China 81573243National Natural Science Foundation of China 81703270
6 · The paper itself

Abstract

backgroundThe circulating concentration of 25(OH)D is widely applied to indicate the vitamin D status, as the directly metabolic genes of 25(OH)D, CYP2R1, and CYP27B1 are associated with the concentration of 25(OH)D. However, the contributions of allelic transmission disequilibrium of single nucleotide polymorphisms (SNPs) in these genes to vitamin D deficiency remain unclear. We aimed at investigating the family-based association between SNPs of CYP2R1 and CYP27B1 and vitamin D deficiency.

methodFirst, SNPs selected in family-based study were screened by a pilot case-control study. Second, allelic transmissions of the selected SNPs were investigated with family-based study (n = 880). Finally, associations between selected SNPs and the concentration of 25(OH)D were verified in siblings (n = 120).

resultsThe results of the pilot case-control study indicated that both CT and TT genotypes of rs4646536 in CYP27B1 could increase the susceptibility of vitamin D deficiency when compared with CC genotype. The adjusted ORs were 2.846 (95%CI 1.312-6.174, P = 0.008) and 2.609 (95%CI 1.197-5.687, P = 0.016), respectively. Furthermore, the results of family-based association test suggested that there was transmission disequilibrium for allele T of rs4646536 in vitamin D deficiency families. In addition, the concentration of 25(OH)D

conclusionsTransmission disequilibrium of allele T of rs4646536 is associated with vitamin D deficiency.

Indexed as

Polymorphism, Single Nucleotide25-Hydroxyvitamin D3 1-alpha-HydroxylaseAdolescentAdultAgedAsian PeopleCalcifediolCase-Control StudiesCholestanetriol 26-MonooxygenaseCytochrome P450 Family 2FemaleGenetic Predisposition to DiseaseHumansMaleMiddle AgedPedigree25-Hydroxyvitamin D3 1-alpha-HydroxylaseCalcifediolCholestanetriol 26-MonooxygenaseCYP27B1 protein, humanCYP2R1 protein, humanCytochrome P450 Family 2CYP27B1family-based associationrs4646536transmission disequilibriumvitamin D

Identifiers

PMID30993743
PMCPMC6642305
OpenAlexW2937614796

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.