Evidence map›Paper›PMID 30992453›Full record

ArticleNature communications2019

A PRPH splice-donor variant associates with reduced sural nerve amplitude and risk of peripheral neuropathy.

Gyda Bjornsdottir, Erna V Ivarsdottir, Kristbjorg Bjarnadottir, Stefania Benonisdottir, Sandra Sif Gylfadottir, Gudny A Arnadottir, Rafn Benediktsson, Gisli Hreinn Halldorsson, Anna Helgadottir, Adalbjorg Jonasdottir and 23 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 14 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Peripherin, A New Promising Biomarker in Neurological Disorders.The European journal of neuroscience · 2025
    Review
  5. Article
  6. Review
  7. Role of the Intermediate Filament Protein Peripherin in Health and Disease.International journal of molecular sciences · 2022
    Review
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

33 authors at 4 institutions in 2 countries.

Gyda BjornsdottirdeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland. gyda.bjornsdottir@decode.is.
Erna V IvarsdottirdeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.ORCID http://orcid.org/0000-0002-2069-0681
Kristbjorg BjarnadottirdeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.
Stefania BenonisdottirdeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.
Sandra Sif GylfadottirDanish Pain Research Center/Aarhus University Hospital, 8000 Aarhus, Denmark.
Gudny A ArnadottirdeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.ORCID http://orcid.org/0000-0001-6571-423X
Rafn BenediktssonFaculty of Medicine, University of Iceland, 101 Reykjavik, Iceland.ORCID http://orcid.org/0000-0002-2954-9801
Gisli Hreinn HalldorssondeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.ORCID http://orcid.org/0000-0001-7067-9862
Anna HelgadottirdeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.ORCID http://orcid.org/0000-0002-1806-2467
Adalbjorg JonasdottirdeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.
Aslaug JonasdottirdeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.
Ingileif JonsdottirdeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.
Anna Margret KristinsdottirdeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.
Olafur Th MagnussondeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.
Gisli MassondeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.
Pall MelsteddeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.
Thorunn RafnardeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.ORCID http://orcid.org/0000-0003-0491-7046
Asgeir SigurdssondeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.
Gunnar SigurdssondeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.
Astros SkuladottirdeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.
Valgerdur SteinthorsdottirdeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.ORCID http://orcid.org/0000-0003-1846-6274
Unnur StyrkarsdottirdeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.ORCID http://orcid.org/0000-0001-8146-8278
Gudmundur ThorgeirssondeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.
Gudmar ThorleifssondeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.
Arnor VikingssonLandspitali-The National University Hospital of Iceland, 101 Reykjavik, Iceland.
Daniel F GudbjartssondeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.ORCID http://orcid.org/0000-0002-5222-9857
Hilma HolmdeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.
Hreinn StefanssondeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.ORCID http://orcid.org/0000-0002-9331-6666
Unnur ThorsteinsdottirdeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.
Gudmundur L NorddahldeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.
Patrick SulemdeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.ORCID http://orcid.org/0000-0001-7123-6123
Thorgeir E ThorgeirssondeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland.
Kari StefanssondeCODE Genetics/Amgen, Inc., 101 Reykjavik, Iceland. kari.stefansson@decode.is.
deCODE Genetics (Iceland) · ISAarhus University Hospital · DKNational University Hospital of Iceland · ISUniversity of Iceland · IS

Funding

Genes for human chronic pain syndromes through whole genome sequencingR01DE022905 · NIDCR · DECODE GENETICS, EHF · PI STEFANSSON, KARI · 2012 to 2016
$2.6M
NIDCR NIH HHS R01 DE022905
6 · The paper itself

Abstract

Nerve conduction (NC) studies generate measures of peripheral nerve function that can reveal underlying pathology due to axonal loss, demyelination or both. We perform a genome-wide association study of sural NC amplitude and velocity in 7045 Icelanders and find a low-frequency splice-donor variant in PRPH (c.996+1G>A; MAF = 1.32%) associating with decreased NC amplitude but not velocity. PRPH encodes peripherin, an intermediate filament (IF) protein involved in cytoskeletal development and maintenance of neurons. Through RNA and protein studies, we show that the variant leads to loss-of-function (LoF), as when over-expressed in a cell line devoid of other IFs, it does not allow formation of the normal filamentous structure of peripherin, yielding instead punctate protein inclusions. Recall of carriers for neurological assessment confirms that from an early age, homozygotes have significantly lower sural NC amplitude than non-carriers and are at risk of a mild, early-onset, sensory-negative, axonal polyneuropathy.

Indexed as

AdultAgedAge of OnsetAxonsCase-Control StudiesCell LineFemaleFollow-Up StudiesGenome-Wide Association StudyHomozygoteHumansIcelandLoss of Function MutationMaleMiddle AgedNeural ConductionPeripherinsPRPH protein, humanRNA Splice Sites

Identifiers

PMID30992453
PMCPMC6468012
OpenAlexW2940429905

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.