Evidence map›Paper›PMID 30992440›Full record

ArticleNature communications2019

Comprehensive genomic and immunological characterization of Chinese non-small cell lung cancer patients.

Xu-Chao Zhang, Jun Wang, Guo-Guang Shao, Qun Wang, Xiaotao Qu, Bo Wang, Christopher Moy, Yue Fan, Zayed Albertyn, Xiayu Huang and 9 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 134 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
134citing papers in PubMed, 3 pooled it
17.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

134 citing papers in PubMed, 3 syntheses or guidelines pooled it, 227 citations in OpenAlex.

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74 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 7 institutions in 2 countries.

Xu-Chao ZhangGuangdong Lung Cancer Institute, Guangdong Provincial People's Hospital and Guangdong Academy of Medical Sciences, 510080, Guangzhou, China.
Jun WangPeking University People's Hospital, Beijing, 100044, China.
Guo-Guang ShaoThoracic Surgery, 1st Hospital of Jilin University, 130021, Changchun, China.
Qun WangZhongshan Hospital, Fudan University, 200032, Shanghai, China.
Xiaotao QuJanssen R&D China, 355 Hong Qiao Road, 200030, Shanghai, China.
Bo WangJanssen R&D China, 355 Hong Qiao Road, 200030, Shanghai, China.
Christopher MoyJanssen R&D, 1400 McKean Road, Spring House, Pennsylvania, 19002, USA.
Yue FanJanssen R&D China, 355 Hong Qiao Road, 200030, Shanghai, China.
Zayed AlbertynNovocraft Technologies, 46300, Petaling Jaya, Selangor, Malaysia.
Xiayu HuangJanssen R&D China, 355 Hong Qiao Road, 200030, Shanghai, China.
Jingyu ZhangJanssen R&D China, 355 Hong Qiao Road, 200030, Shanghai, China.
Yang QiuJanssen R&D China, 355 Hong Qiao Road, 200030, Shanghai, China.
Suso PlateroJanssen R&D, 1400 McKean Road, Spring House, Pennsylvania, 19002, USA.
Matthew V LorenziJanssen R&D, 1400 McKean Road, Spring House, Pennsylvania, 19002, USA.
Enrique ZudaireJanssen R&D, 1400 McKean Road, Spring House, Pennsylvania, 19002, USA.
Jennifer YangJanssen R&D China, 355 Hong Qiao Road, 200030, Shanghai, China.
Ying ChengDepartment of Medical Oncology, Jilin Provincial Cancer Hospital, 130012, Changchun, China.
Lin XuDepartment of Thoracic Surgery, Nanjing Medical University Affiliated Cancer Hospital, Jiangsu Key Laboratory of Molecular and Translational Cancer Research, Cancer Institute of Jiangsu Province, 210009, Nanjing, China.
Yi-Long WuGuangdong Lung Cancer Institute, Guangdong Provincial People's Hospital and Guangdong Academy of Medical Sciences, 510080, Guangzhou, China. syylwu@live.cn.ORCID http://orcid.org/0000-0002-3611-0258
Janssen (United States) · USGuangdong Academy of Medical Sciences · CNCraft Technologies (United States) · USFudan University · CNJiangsu Cancer Hospital · CNJilin University · CNPeking University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Deep understanding of the genomic and immunological differences between Chinese and Western lung cancer patients is of great importance for target therapy selection and development for Chinese patients. Here we report an extensive molecular and immune profiling study of 245 Chinese patients with non-small cell lung cancer. Tumor-infiltrating lymphocyte estimated using immune cell signatures is found to be significantly higher in adenocarcinoma (ADC, 72.5%) compared with squamous cell carcinoma (SQCC, 54.4%). The correlation of genomic alterations with immune signatures reveals that low immune infiltration was associated with EGFR mutations in ADC samples, PI3K and/or WNT pathway activation in SQCC. While KRAS mutations are found to be significantly associated with T cell infiltration in ADC samples. The SQCC patients with high antigen presentation machinery and cytotoxic T cell signature scores are found to have a prolonged overall survival time.

Indexed as

Adenocarcinoma of LungAgedAntigen PresentationAsian PeopleCarcinoma, Non-Small-Cell LungCarcinoma, Squamous CellDatasets as TopicErbB ReceptorsFemaleGenomicsHumansLung NeoplasmsLymphocytes, Tumor-InfiltratingMaleMiddle AgedMutationEGFR protein, humanErbB ReceptorsKRAS protein, humanProto-Oncogene Proteins p21(ras)

Identifiers

PMID30992440
PMCPMC6467893
OpenAlexW2938898812

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.