Evidence map›Paper›PMID 30992358›Full record

ArticlemBio2019

Uncultured Microbial Phyla Suggest Mechanisms for Multi-Thousand-Year Subsistence in Baltic Sea Sediments.

Jordan T Bird, Eric D Tague, Laura Zinke, Jenna M Schmidt, Andrew D Steen, Brandi Reese, Ian P G Marshall, Gordon Webster, Andrew Weightman, Hector F Castro and 2 more

Open access · goldAbstract read
In one paragraph

Article in mBio, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
7.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 72 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 4 countries.

Jordan T BirdUniversity of Tennessee, Knoxville, Tennessee, USA.ORCID 0000-0001-5753-6058
Eric D TagueUniversity of Tennessee, Knoxville, Tennessee, USA.
Laura ZinkeUniversity of Southern California, Los Angeles, California, USA.
Jenna M SchmidtUniversity of Tennessee, Knoxville, Tennessee, USA.
Andrew D SteenUniversity of Tennessee, Knoxville, Tennessee, USA.ORCID 0000-0003-4297-4332
Brandi ReeseTexas A&M Corpus Christi, Corpus Christi, Texas, USA.
Ian P G MarshallAarhus University, Aarhus, Denmark.
Gordon WebsterCardiff University, Cardiff, Wales.ORCID 0000-0002-9530-7835
Andrew WeightmanCardiff University, Cardiff, Wales.
Hector F CastroUniversity of Tennessee, Knoxville, Tennessee, USA.
Shawn R CampagnaUniversity of Tennessee, Knoxville, Tennessee, USA.
Karen G LloydUniversity of Tennessee, Knoxville, Tennessee, USA klloyd@utk.edu.ORCID 0000-0003-0914-6375
University of Tennessee at Knoxville · USUniversity of Wales Institute Cardiff · SGAarhus University · DKTexas A&M University – Corpus Christi · USUniversity of Southern California · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Energy-starved microbes in deep marine sediments subsist at near-zero growth for thousands of years, yet the mechanisms for their subsistence are unknown because no model strains have been cultivated from most of these groups. We investigated Baltic Sea sediments with single-cell genomics, metabolomics, metatranscriptomics, and enzyme assays to identify possible subsistence mechanisms employed by uncultured

Indexed as

MetagenomePhylogenyArchaeaBacteriaBaltic StatesDeltaproteobacteriaEcosystemGenomicsGeologic SedimentsOceans and SeasRNA, Ribosomal, 16SSequence Analysis, DNATime FactorsRNA, Ribosomal, 16Sdeep subsurfaceenzyme assayslow energymarine sedimentsmetabolomicsmetatranscriptomicssingle-cell genomicssubsistence

Identifiers

PMID30992358
PMCPMC6469976
OpenAlexW2938517501

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.