Evidence map›Paper›PMID 30991936›Full record

ArticleOpen biology2019

Crystal structure of human RIOK2 bound to a specific inhibitor.

Jing Wang, Thibault Varin, Michal Vieth, Jonathan M Elkins

Open access · goldAbstract read
In one paragraph

Article in Open biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 3 countries.

Jing Wang1 Structural Genomics Consortium, Nuffield Department of Clinical Medicine, University of Oxford , Old Road Campus Research Building, Roosevelt Drive, Oxford OX3 7DQ , UK.
Thibault Varin2 Discovery Chemistry Research and Technologies, Eli Lilly and Company, Lilly Corporate Center , Indianapolis, IN 46285 , USA.
Michal Vieth3 Discovery Chemistry Research and Technologies, Eli Lilly and Company, Lilly Biotechnology Center , 10290 Campus Point Drive, San Diego, CA 92121 , USA.
Jonathan M Elkins1 Structural Genomics Consortium, Nuffield Department of Clinical Medicine, University of Oxford , Old Road Campus Research Building, Roosevelt Drive, Oxford OX3 7DQ , UK.
Eli Lilly (United States) · USUniversidade Estadual de Campinas (UNICAMP) · BRUniversity of Oxford · GB

Funding

Wellcome TrustWellcome Trust 106169/ZZ14/Z
6 · The paper itself

Abstract

The RIO kinases (RIOKs) are a universal family of atypical kinases that are essential for assembly of the pre-40S ribosome complex. Here, we present the crystal structure of human RIO kinase 2 (RIOK2) bound to a specific inhibitor. This first crystal structure of an inhibitor-bound RIO kinase reveals the binding mode of the inhibitor and explains the structure-activity relationship of the inhibitor series. The inhibitor binds in the ATP-binding site and forms extensive hydrophobic interactions with residues at the entrance to the ATP-binding site. Analysis of the conservation of active site residues reveals the reasons for the specificity of the inhibitor for RIOK2 over RIOK1 and RIOK3, and it provides a template for inhibitor design against the human RIOK family.

Indexed as

Catalytic DomainProtein ConformationBinding SitesCrystallography, X-RayHumansMolecular StructureProtein BindingProtein Kinase InhibitorsProtein Serine-Threonine KinasesStructure-Activity RelationshipProtein Kinase InhibitorsProtein Serine-Threonine KinasesRIOK2 protein, human40scrystal structureinhibitorribosome assemblyRIOK2RIO kinase

Identifiers

PMID30991936
PMCPMC6501643
OpenAlexW2937689677

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.