Evidence map›Paper›PMID 30990168›Full record

ArticleeLife2019

Quantification of microenvironmental metabolites in murine cancers reveals determinants of tumor nutrient availability.

Mark R Sullivan, Laura V Danai, Caroline A Lewis, Sze Ham Chan, Dan Y Gui, Tenzin Kunchok, Emily A Dennstedt, Matthew G Vander Heiden, Alexander Muir

Open access · goldAbstract read
In one paragraph

Article in eLife, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 384 papers.

0numbers the graph read from it
0cells of the map it votes in
384citing papers in PubMed
18.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

384 citing papers in PubMed, 581 citations in OpenAlex.

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324 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Mark R SullivanKoch Institute for Integrative Cancer Research, Department of Biology, Massachusetts Institute of Technology, Cambridge, United States.ORCID 0000-0001-5765-0459
Laura V DanaiKoch Institute for Integrative Cancer Research, Department of Biology, Massachusetts Institute of Technology, Cambridge, United States.
Caroline A LewisWhitehead Institute for Biomedical Research, Massachusetts Institute of Technology, Cambridge, United States.ORCID 0000-0003-1787-5084
Sze Ham ChanWhitehead Institute for Biomedical Research, Massachusetts Institute of Technology, Cambridge, United States.
Dan Y GuiKoch Institute for Integrative Cancer Research, Department of Biology, Massachusetts Institute of Technology, Cambridge, United States.
Tenzin KunchokWhitehead Institute for Biomedical Research, Massachusetts Institute of Technology, Cambridge, United States.
Emily A DennstedtKoch Institute for Integrative Cancer Research, Department of Biology, Massachusetts Institute of Technology, Cambridge, United States.
Matthew G Vander HeidenKoch Institute for Integrative Cancer Research, Department of Biology, Massachusetts Institute of Technology, Cambridge, United States.ORCID 0000-0002-6702-4192
Alexander MuirKoch Institute for Integrative Cancer Research, Department of Biology, Massachusetts Institute of Technology, Cambridge, United States.ORCID 0000-0003-3811-3054
Massachusetts Institute of Technology · USWhitehead Institute for Biomedical Research · USBoston University · USUniversity of Chicago · USUniversity of Massachusetts Amherst · US

Funding

VIRUS PRODUCTION COREP30CA014051 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI Jacqueline A. Lees · 1985 to 2026
$93.9M
Medical Scientist Training ProgramT32GM007753 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WALENSKY, LOREN DAVID · 1985 to 2021
$50.0M
PRE-DOCTORAL TRAINING IN THE BIOLOGICAL SCIENCEST32GM007287 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI BELL, STEPHEN P., KEATING, AMY E · 1985 to 2019
$40.8M
Analysis of cancer cell metabolism in diverse environmental conditionsR01CA201276 · NCI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI VANDER HEIDEN, MATTHEW G., VITKUP, DENNIS · 2016 to 2020
$3.0M
Regulation of glucose metabolism to allow tumor initiation and growthR01CA168653 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI VANDER HEIDEN, MATTHEW G. · 2013 to 2019
$1.9M
Understanding metabolic pathways that support redox homeostasis in cancerF32CA213810 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI MUIR, ALEXANDER · 2017 to 2018
$112k
Understanding cell intrinsic and context dependent metabolic adaptations of cancer cellF32CA210421 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI DANAI, LAURA VICTORIA · 2016 to 2017
$88k
Koch Institute for Integrative Cancer Research Koch Institute Graduate FellowshipNCI NIH HHS F32 CA210421NCI NIH HHS F32CA210421NCI NIH HHS F32 CA213810NCI NIH HHS F32CA213810NCI NIH HHS P30CA1405141NCI NIH HHS R01 CA168653NCI NIH HHS R01CA168653NCI NIH HHS R01 CA201276NCI NIH HHS R01CA201276NIGMS NIH HHS T32 GM007287NIGMS NIH HHS T32 GM007753
6 · The paper itself

Abstract

Cancer cell metabolism is heavily influenced by microenvironmental factors, including nutrient availability. Therefore, knowledge of microenvironmental nutrient levels is essential to understand tumor metabolism. To measure the extracellular nutrient levels available to tumors, we utilized quantitative metabolomics methods to measure the absolute concentrations of >118 metabolites in plasma and tumor interstitial fluid, the extracellular fluid that perfuses tumors. Comparison of nutrient levels in tumor interstitial fluid and plasma revealed that the nutrients available to tumors differ from those present in circulation. Further, by comparing interstitial fluid nutrient levels between autochthonous and transplant models of murine pancreatic and lung adenocarcinoma, we found that tumor type, anatomical location and animal diet affect local nutrient availability. These data provide a comprehensive characterization of the nutrients present in the tumor microenvironment of widely used models of lung and pancreatic cancer and identify factors that influence metabolite levels in tumors.

Indexed as

Tumor MicroenvironmentAnimalsCell Line, TumorExtracellular FluidFemaleHeterograftsMaleMetabolomicsMice, Inbred C57BLNeoplasmsNutrientsPlasmaNutrientsbiochemistrycancercancer biologychemical biologymass spectrometrymetabolismmetabolomicsmicroenvironmentmousepancreatic adenocarcinoma

Identifiers

PMID30990168
PMCPMC6510537
OpenAlexW2950983102

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.