Evidence map›Paper›PMID 30988611›Full record

ArticleInternational journal of nanomedicine2019

Structural switching electrochemical DNA aptasensor for the rapid diagnosis of tuberculous meningitis.

Ritu Das, Abhijeet Dhiman, Subodh Kumar Mishra, Sagarika Haldar, Neera Sharma, Anjali Bansal, Yusra Ahmad, Amit Kumar, Jaya Sivaswami Tyagi, Tarun Kumar Sharma

Open access · goldAbstract read
In one paragraph

Article in International journal of nanomedicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 30 citations in OpenAlex.

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  11. Rapid diagnosis of TB using Aptamer-based assays forLung India : official organ of Indian Chest Society
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Ritu DasAptaBharat Innovation Pvt. Ltd., Faridabad, India, tarun@thsti.res.in.
Abhijeet DhimanDepartment of Biotechnology, All India Institute of Medical Sciences (AIIMS), New Delhi, India, jayatyagi.aiims@gmail.com.
Subodh Kumar MishraDiscipline of Biosciences and Biomedical Engineering, Indian Institute of Technology Indore, Simrol, India.
Sagarika HaldarCenter for Biodesign and Diagnostics, Translational Health Science and Technology Institute, Faridabad, India, jayatyagi.aiims@gmail.com, tarun@thsti.res.in.
Neera SharmaDr Ram Manohar Lohia Hospital, New Delhi, India.
Anjali BansalDr Ram Manohar Lohia Hospital, New Delhi, India.
Yusra AhmadFaculty of Pharmacy, Uttarakhand Technical University (UTU), Dehradun, India.
Amit KumarDiscipline of Biosciences and Biomedical Engineering, Indian Institute of Technology Indore, Simrol, India.
Jaya Sivaswami TyagiDepartment of Biotechnology, All India Institute of Medical Sciences (AIIMS), New Delhi, India, jayatyagi.aiims@gmail.com.
Tarun Kumar SharmaAptaBharat Innovation Pvt. Ltd., Faridabad, India, tarun@thsti.res.in.
Translational Health Science and Technology Institute · INAtal Bihari Vajpayee Institute of Medical Sciences and Dr. Ram Manohar Lohia Hospital · INUttarakhand Technical University · INIndian Institute of Technology Indore · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundTuberculous meningitis (TBM) is the most devastating manifestation of extra-pulmonary tuberculosis. About 33% of TBM patients die due to very late diagnosis of the disease. Conventional diagnostic methods based on signs and symptoms, cerebrospinal fluid (CSF) smear microscopy or liquid culture suffer from either poor sensitivity or long turnaround time (up to 8 weeks). Therefore, in order to manage the disease efficiently, there is an urgent and unmet need for a rapid and reliable diagnostic test.

methodsIn the current study, to address the diagnostic challenge of TBM, a highly rapid and sensitive structural switching electrochemical aptasensor was developed by combining the electrochemical property of methylene blue (MB) with the molecular recognition ability of a ssDNA aptamer. To demonstrate the clinical diagnostic utility of the developed aptasensor, a blinded study was performed on 81 archived CSF specimens using differential pulse voltammetry.

resultsThe electrochemical aptasensor developed in the current study can detect as low as 10 pg HspX in CSF background and yields a highly discriminatory response (

conclusionIn summary, we demonstrate a new aptamer-based electrochemical biosensing strategy by exploiting the target-induced structural switching of H63 SL-2 M6 aptamer and electroactivity of aptamer-tagged MB for the detection of HspX in CSF samples for the diagnosis of TBM. Further, the clinical utility of this sensor could be extended for the diagnosis of other forms of tuberculosis in the near future.

Indexed as

Antigens, BacterialAptamers, NucleotideBacterial ProteinsBiosensing TechniquesDiagnostic Tests, RoutineDNA, BacterialElectrochemical TechniquesHumansMycobacterium tuberculosisTuberculosis, MeningealAntigens, BacterialAptamers, NucleotideBacterial ProteinsDNA, BacterialHspX protein, Mycobacterium tuberculosisaptamersclinical diagnosticelectrochemical sensingMycobacterium tuberculosisTB meningitis

Identifiers

PMID30988611
PMCPMC6440448
OpenAlexW2924150104

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.