Evidence map›Paper›PMID 30988486›Full record

ArticleNature ecology & evolution2019

Morphology and genome of a snailfish from the Mariana Trench provide insights into deep-sea adaptation.

Kun Wang, Yanjun Shen, Yongzhi Yang, Xiaoni Gan, Guichun Liu, Kuang Hu, Yongxin Li, Zhaoming Gao, Li Zhu, Guoyong Yan and 16 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature ecology & evolution, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed.

  1. Review
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  7. ZooKeys · 2026
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  14. Review
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  17. The many origins of extremophile fishes.Proceedings. Biological sciences · 2025
    Article
  18. Review
  19. Article
  20. Article

22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors.

Kun Wang *Center for Ecological and Environmental Sciences, Northwestern Polytechnical University, Xi'an, China.ORCID http://orcid.org/0000-0001-6059-6529
Yanjun Shen *Key Laboratory of Aquatic Biodiversity and Conservation, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, China.
Yongzhi Yang *State Key Laboratory of Grassland Agro-Ecosystems, School of Life Sciences, Lanzhou University, Lanzhou, China.
Xiaoni Gan *Key Laboratory of Aquatic Biodiversity and Conservation, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, China.
Guichun LiuCenter for Ecological and Environmental Sciences, Northwestern Polytechnical University, Xi'an, China.
Kuang HuCenter for Ecological and Environmental Sciences, Northwestern Polytechnical University, Xi'an, China.
Yongxin LiCenter for Ecological and Environmental Sciences, Northwestern Polytechnical University, Xi'an, China.
Zhaoming GaoInstitute of Deep Sea Science and Engineering, Chinese Academy of Sciences, Sanya, China.
Li ZhuState Key Laboratory of Grassland Agro-Ecosystems, School of Life Sciences, Lanzhou University, Lanzhou, China.
Guoyong YanInstitute of Deep Sea Science and Engineering, Chinese Academy of Sciences, Sanya, China.
Lisheng HeInstitute of Deep Sea Science and Engineering, Chinese Academy of Sciences, Sanya, China.
Xiujuan ShanKey Laboratory of Sustainable Development of Marine Fisheries, Ministry of Agriculture and Rural Affairs, Qingdao, China.
Liandong YangKey Laboratory of Aquatic Biodiversity and Conservation, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, China.
Suxiang LuKey Laboratory of Aquatic Biodiversity and Conservation, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, China.
Honghui ZengKey Laboratory of Aquatic Biodiversity and Conservation, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, China.
Xiangyu PanCollege of Animal Science and Technology, Northwest A&F University, Xianyang, China.ORCID http://orcid.org/0000-0001-6841-7652
Chang LiuCenter for Ecological and Environmental Sciences, Northwestern Polytechnical University, Xi'an, China.
Yuan YuanCenter for Ecological and Environmental Sciences, Northwestern Polytechnical University, Xi'an, China.
Chenguang FengCenter for Ecological and Environmental Sciences, Northwestern Polytechnical University, Xi'an, China.
Wenjie XuCenter for Ecological and Environmental Sciences, Northwestern Polytechnical University, Xi'an, China.
Chenglong ZhuCenter for Ecological and Environmental Sciences, Northwestern Polytechnical University, Xi'an, China.
Wuhan XiaoKey Laboratory of Aquatic Biodiversity and Conservation, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, China.
Yang DongBiological Big Data College, Yunnan Agricultural University, Kunming, China.
Wen WangCenter for Ecological and Environmental Sciences, Northwestern Polytechnical University, Xi'an, China. wwang@mail.kiz.ac.cn.ORCID http://orcid.org/0000-0002-7801-2066
Qiang QiuCenter for Ecological and Environmental Sciences, Northwestern Polytechnical University, Xi'an, China. qiuqiang@lzu.edu.cn.ORCID http://orcid.org/0000-0002-9874-271X
Shunping HeInstitute of Deep Sea Science and Engineering, Chinese Academy of Sciences, Sanya, China. clad@ihb.ac.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

It is largely unknown how living organisms-especially vertebrates-survive and thrive in the coldness, darkness and high pressures of the hadal zone. Here, we describe the unique morphology and genome of Pseudoliparis swirei-a recently described snailfish species living below a depth of 6,000 m in the Mariana Trench. Unlike closely related shallow sea species, P. swirei has transparent, unpigmented skin and scales, thin and incompletely ossified bones, an inflated stomach and a non-closed skull. Phylogenetic analyses show that P. swirei diverged from a close relative living near the sea surface about 20 million years ago and has abundant genetic diversity. Genomic analyses reveal that: (1) the bone Gla protein (bglap) gene has a frameshift mutation that may cause early termination of cartilage calcification; (2) cell membrane fluidity and transport protein activity in P. swirei may have been enhanced by changes in protein sequences and gene expansion; and (3) the stability of its proteins may have been increased by critical mutations in the trimethylamine N-oxide-synthesizing enzyme and hsp90 chaperone protein. Our results provide insights into the morphological, physiological and molecular evolution of hadal vertebrates.

Indexed as

AcclimatizationAdaptation, PhysiologicalAnimalsPhylogeny

Identifiers

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.