Evidence map›Paper›PMID 30988362›Full record

ArticleScientific reports2019

Repeat domain-associated O-glycans govern PMEL fibrillar sheet architecture.

Morven Graham, Athanasia C Tzika, Susan M Mitchell, Xinran Liu, Ralf M Leonhardt

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.7field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. The dynamic behavior of chromatophores marks the transition from bands to spots in leopard geckos.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  6. Article
  7. Article
  8. Melanosome Biogenesis in the Pigmentation of Mammalian Skin.Integrative and comparative biology · 2021
    Review
  9. Article
  10. Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Morven GrahamDepartment of Cell Biology, Yale University School of Medicine, 333 Cedar Street, New Haven, CT, 06519, USA.
Athanasia C TzikaDepartment of Genetics & Evolution, Laboratory of Artificial & Natural Evolution (LANE), Sciences III Building, 1211, Geneva, 4, Switzerland.
Susan M MitchellDepartment of Immunobiology, Yale University School of Medicine, 300 Cedar Street, New Haven, CT, 06519, USA.
Xinran LiuDepartment of Cell Biology, Yale University School of Medicine, 333 Cedar Street, New Haven, CT, 06519, USA.
Ralf M LeonhardtDepartment of Immunobiology, Yale University School of Medicine, 300 Cedar Street, New Haven, CT, 06519, USA. Ralf.Leonhardt@boehringer-ingelheim.com.ORCID http://orcid.org/0000-0001-6673-8217
Yale University · US

Funding

Mechanism of amyloid formation during melanosome biogenesisR21AR068518 · NIAMS · YALE UNIVERSITY · PI LEONHARDT, RALF MAX · 2016 to 2017
$405k
NIAMS NIH HHS R21 AR068518
6 · The paper itself

Abstract

PMEL is a pigment cell-specific protein that forms a functional amyloid matrix in melanosomes. The matrix consists of well-separated fibrillar sheets on which the pigment melanin is deposited. Using electron tomography, we demonstrate that this sheet architecture is governed by the PMEL repeat (RPT) domain, which associates with the amyloid as an accessory proteolytic fragment. Thus, the RPT domain is dispensable for amyloid formation as such but shapes the morphology of the matrix, probably in order to maximize the surface area available for pigment adsorption. Although the primary amino acid sequence of the RPT domain differs vastly among various vertebrates, we show that it is a functionally conserved, interchangeable module. RPT domains of all species are predicted to be very highly O-glycosylated, which is likely the common defining feature of this domain. O-glycosylation is indeed essential for RPT domain function and the establishment of the PMEL sheet architecture. Thus, O-glycosylation, not amino acid sequence, appears to be the major factor governing the characteristic PMEL amyloid morphology.

Indexed as

Protein DomainsAmyloidogenic ProteinsAnimalsCell Line, TumorChickensColubridaeGlycosylationgp100 Melanoma AntigenHumansMelanosomesMicePolysaccharidesXenopus laevisZebrafishAmyloidogenic Proteinsgp100 Melanoma AntigenPolysaccharides

Identifiers

PMID30988362
PMCPMC6465243
OpenAlexW2938892108

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.