ArticleScientific reports2019
The horse Y chromosome as an informative marker for tracing sire lines.
Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
29 citing papers in PubMed, 77 citations in OpenAlex.
- Validating a Target-Enrichment Design for Capturing Uniparental Haplotypes in Ancient Domesticated Animals.Molecular ecology resources · 2025Article
- IMAGE001: A new livestock multispecies SNP array to characterize genomic variation in European livestock gene bank collections.Animal genetics · 2025Article
- Late Iron Age and Roman equine breeding north of the Alps: Genetic insights and cultural implications.iScience · 2025Article
- The genomic history of Iberian horses since the last Ice Age.Nature communications · 2025Article
- The global spread of Oriental Horses in the past 1,500 years through the lens of the Y chromosome.Proceedings of the National Academy of Sciences of the United States of America · 2024Article
- Analyses of whole-genome sequences from 185 North American Thoroughbred horses, spanning 5 generations.Scientific reports · 2024Article
- Using high-density SNP data to unravel the origin of the Franches-Montagnes horse breed.Genetics, selection, evolution : GSE · 2024Article
- Article
- An endothelial regulatory module links blood pressure regulation with elite athletic performance.PLoS genetics · 2024Article
- Inferences about the population history ofEcology and evolution · 2024Article
- Mitochondrial DNA and Y chromosome reveal the genetic structure of the native Polish Konik horse population.PeerJ · 2024Article
- Article
- Refining the evolutionary tree of the horse Y chromosome.Scientific reports · 2023Article
- DNA methylation-based profiling of horse archaeological remains for age-at-death and castration.iScience · 2023Article
- Reconstruction of the Major Maternal and Paternal Lineages in the Feral New Zealand Kaimanawa Horses.Animals : an open access journal from MDPI · 2022Article
- Unlocking Horse Y Chromosome Diversity.Genes · 2022Review
- Copy number variation of horse Y chromosome genes in normal equine populations and in horses with abnormal sex development and subfertility: relationship of copy number variations with Y haplogroups.G3 (Bethesda, Md.) · 2022Article
- The Innovative Informatics Approaches of High-Throughput Technologies in Livestock: Spearheading the Sustainability and Resiliency of Agrigenomics Research.Life (Basel, Switzerland) · 2022Review
- Y Chromosome Haplotypes Enlighten Origin, Influence, and Breeding History of North African Barb Horses.Animals : an open access journal from MDPI · 2022Article
- Y-Chromosomal Insights into Breeding History and Sire Line Genealogies of Arabian Horses.Genes · 2022Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
25 authors at 13 institutions in 8 countries.
Funding
Abstract
Analysis of the Y chromosome is the best-established way to reconstruct paternal family history in humans. Here, we applied fine-scaled Y-chromosomal haplotyping in horses with biallelic markers and demonstrate the potential of our approach to address the ancestry of sire lines. We de novo assembled a draft reference of the male-specific region of the Y chromosome from Illumina short reads and then screened 5.8 million basepairs for variants in 130 specimens from intensively selected and rural breeds and nine Przewalski's horses. Among domestic horses we confirmed the predominance of a young'crown haplogroup' in Central European and North American breeds. Within the crown, we distinguished 58 haplotypes based on 211 variants, forming three major haplogroups. In addition to two previously characterised haplogroups, one observed in Arabian/Coldblooded and the other in Turkoman/Thoroughbred horses, we uncovered a third haplogroup containing Iberian lines and a North African Barb Horse. In a genealogical showcase, we distinguished the patrilines of the three English Thoroughbred founder stallions and resolved a historic controversy over the parentage of the horse 'Galopin', born in 1872. We observed two nearly instantaneous radiations in the history of Central and Northern European Y-chromosomal lineages that both occurred after domestication 5,500 years ago.
Indexed as
Identifiers
What OpenQuestion holds
Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.