Evidence map›Paper›PMID 30988311›Full record

ArticleNature communications2019

QUIRKY regulates root epidermal cell patterning through stabilizing SCRAMBLED to control CAPRICE movement in Arabidopsis.

Jae Hyo Song, Su-Hwan Kwak, Kyoung Hee Nam, John Schiefelbein, Myeong Min Lee

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
5.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
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  8. Integration of ATAC-Seq and RNA-Seq Reveals the Role ofInternational journal of molecular sciences · 2025
    Article
  9. Review
  10. Article
  11. Review
  12. Root Hair Imaging Using Confocal Microscopy.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  13. Division of cortical cells is regulated by auxin inFrontiers in plant science · 2022
    Article
  14. Intercellular trafficking via plasmodesmata: molecular layers of complexity.Cellular and molecular life sciences : CMLS · 2021
    Review
  15. Review
  16. Article
  17. TheDevelopment (Cambridge, England) · 2020
    Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Jae Hyo SongDepartment of Systems Biology, Yonsei University, 50 Yonsei-ro, Seoul, 03722, Korea.ORCID http://orcid.org/0000-0003-4324-9335
Su-Hwan KwakDepartment of Biology, Long Island University, 1 University Plaza, Brooklyn, NY, 11201, USA.
Kyoung Hee NamDepartment of Biological Science, Sookmyung Women's University, Cheongpa-ro 47-gil 100, Yongsan-gu, Seoul, 04310, Korea.
John SchiefelbeinDepartment of Molecular, Cellular, and Developmental Biology, University of Michigan, Ann Arbor, MI, 48109, USA.ORCID http://orcid.org/0000-0002-0560-5872
Myeong Min LeeDepartment of Systems Biology, Yonsei University, 50 Yonsei-ro, Seoul, 03722, Korea. mmlee@yonsei.ac.kr.ORCID http://orcid.org/0000-0003-1161-9055
Yonsei University · KRLong Island University · USSookmyung Women's University · KRUniversity of Michigan · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SCM, a leucine-rich repeat receptor-like kinase, is required for root epidermal cells to appropriately interpret their location and generate the proper cell-type pattern during Arabidopsis root development. Here, via a screen for scm-like mutants we describe a new allele of the QKY gene. We find that QKY is required for the appropriate spatial expression of several epidermal cell fate regulators in a similar manner as SCM in roots, and that QKY and SCM are necessary for the efficient movement of CPC between epidermal cells. We also show that turnover of SCM is mediated by a vacuolar degradation pathway triggered by ubiquitination, and that QKY prevents this SCM ubiquitination through their physical interaction. These results suggest that QKY stabilizes SCM through interaction, and this complex facilitates CPC movement between the epidermal cells to help establish the cell-type pattern in the Arabidopsis root epidermis.

Indexed as

ArabidopsisArabidopsis ProteinsMorphogenesisPlant EpidermisPlant RootsProto-Oncogene Proteins c-mybReceptor Protein-Tyrosine KinasesSignal TransductionArabidopsis ProteinsCPC protein, ArabidopsisProto-Oncogene Proteins c-mybQUIRKY protein, ArabidopsisReceptor Protein-Tyrosine KinasesSUB protein, Arabidopsis

Identifiers

PMID30988311
PMCPMC6465271
OpenAlexW2939363431

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.