Evidence map›Paper›PMID 30984378›Full record

ReviewF1000Research2019

New insights emerge as antibody repertoire diversification meets chromosome conformation.

Amy L Kenter, Ann J Feeney

Open access · goldAbstract readReview
In one paragraph

Review in F1000Research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Epigenetics in B-CLL.International journal of genomics · 2026
    Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Genome Topology Control of Antigen Receptor Gene Assembly.Journal of immunology (Baltimore, Md. : 1950) · 2020
    Review
  9. Alterations in chromatin at antigen receptor loci define lineage progression during B lymphopoiesis.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  10. Two Successive Inversional Vβ Rearrangements on a SingleJournal of immunology (Baltimore, Md. : 1950) · 2020
    Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Amy L KenterDepartment of Microbiology and Immunology, University of Illinois College of Medicine, Chicago, IL, 60612-7344, USA.ORCID 0000-0003-1419-5550
Ann J FeeneyDepartment of Immunology and Microbiology, The Scripps Research Institute, La Jolla, CA, 92037, USA.
Scripps Research Institute · USUniversity of Illinois Urbana-Champaign · US

Funding

Chromatin infrastructure of the Igh locus and its influence on VH gene usageR01AI121286 · NIAID · UNIVERSITY OF ILLINOIS AT CHICAGO · PI KENTER, AMY L · 2016 to 2020
$4.2M
Role of CTCF and Cohesin in V(D)J RearrangementR01AI082918 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI FEENEY, ANN J · 2010 to 2014
$2.4M
Deciphering high resolution Igh chromatin topologies and impacts on Ig repertoireR21AI137865 · NIAID · UNIVERSITY OF ILLINOIS AT CHICAGO · PI KENTER, AMY L · 2018 to 2019
$428k
Role of chromosomal context in IgVk locus novel enhancer effects on individual Vk gene utilization, germline transcription, and long-range interactions within the Igk locusR21AI137867 · NIAID · SCRIPPS RESEARCH INSTITUTE, THE · PI FEENEY, ANN J · 2018 to 2018
$387k
NIAID NIH HHS R01 AI082918NIAID NIH HHS R01 AI121286NIAID NIH HHS R21 AI137865NIAID NIH HHS R21 AI137867
6 · The paper itself

Abstract

Vast repertoires of unique antigen receptors are created in developing lymphocytes. The antigen receptor loci contain many variable (V), diversity (D), and joining (J) gene segments that are arrayed across very large genomic expanses and are joined to form variable-region exons. This process creates the potential for an organism to respond to large numbers of different pathogens. Here, we consider the underlying molecular mechanisms that favor some V genes for recombination prior to selection of the final antigen receptor repertoire. We discuss chromatin structures that form in antigen receptor loci to permit spatial proximity among the V, D, and J gene segments and how these relate to the generation of antigen receptor diversity.

Indexed as

ChromatinLymphocytesReceptors, AntigenV(D)J RecombinationChromatinReceptors, Antigenantibody genesB cellsV(D)J recombination

Identifiers

PMID30984378
PMCPMC6439775
OpenAlexW2924982110

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.