Evidence map›Paper›PMID 30983323›Full record

ArticleAnalytical chemistry2019

Highly Sensitive O-Glycan Profiling for Human Serum Proteins Reveals Gender-Dependent Changes in Colorectal Cancer Patients.

Solomon T Gizaw, Stefan Gaunitz, Milos V Novotny

Abstract read
In one paragraph

Article in Analytical chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. High-Throughput Glycomic Methods.Chemical reviews · 2022
    Review
  5. Article
  6. AlteredBiomolecules · 2021
    Article
  7. Article
  8. Article
  9. Serum-based ComprehensiveIn vivo (Athens, Greece)
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Solomon T GizawDepartment of Chemistry , Indiana University , Bloomington , Indiana 47405 , United States.
Stefan GaunitzDepartment of Chemistry , Indiana University , Bloomington , Indiana 47405 , United States.
Milos V NovotnyDepartment of Chemistry , Indiana University , Bloomington , Indiana 47405 , United States.ORCID 0000-0001-5530-7059

Funding

Early Cancer Detection & Prognosis through GlycomicsU01CA128535 · NCI · TRUSTEES OF INDIANA UNIVERSITY · PI NOVOTNY, MILOS · 2007 to 2011
$1.9M
Microfluidic Devices for Cancer Screening by N-Glycan AnalysisR01GM106084 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI JACOBSON, STEPHEN C · 2014 to 2017
$1.2M
New Chromatographic Technologies for Resolving Carbohydrate IsomersR21GM118340 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI NOVOTNY, MILOS · 2015 to 2016
$581k
NCI NIH HHS U01 CA128535NIGMS NIH HHS R01 GM106084NIGMS NIH HHS R21 GM118340
6 · The paper itself

Abstract

A newly developed microscale protocol for profiling serum O-glycans has been validated here with multiple serum samples obtained from different cohorts of colorectal cancer patients. The simultaneous cleavage and permethylation steps in this procedure preserve the integrity of released minor O-glycans, so that 39 O-linked oligosaccharides could be reliably recorded in a profile. This is far more detected components than shown in any previous studies. The analytical results were further subjected to a battery of statistical tests. Our O-glycan compositions compare favorably with the previous results obtained with solid tumors and cancer cell lines, suggesting that smaller circulatory mucins protruding into the blood circulation may be one source of O-glycans that we observe in the serum samples. While the control vs cancer statistical comparisons generally agree with the expected glycosylation trends, the comparisons of male vs female subjects have led to some surprising results for which we do not have a ready explanation due to lack of any literature describing hormonal control of O-glycosylation. Our results thus underscore the necessity of applying new analytical technologies to clinically interesting sample sets.

Indexed as

Blood ProteinsColorectal NeoplasmsFemaleHumansMalePolysaccharidesBlood ProteinsPolysaccharides

Identifiers

PMID30983323
PMCPMC6602050

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.