Evidence map›Paper›PMID 30982600›Full record

ArticleCell2019

Yeast Ataxin-2 Forms an Intracellular Condensate Required for the Inhibition of TORC1 Signaling during Respiratory Growth.

Yu-San Yang, Masato Kato, Xi Wu, Athanasios Litsios, Benjamin M Sutter, Yun Wang, Chien-Hsiang Hsu, N Ezgi Wood, Andrew Lemoff, Hamid Mirzaei and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 105 citations in OpenAlex.

  1. Redox-Dependent Chaperoning of GBF1 Condensates Regulates Seed Germination in Arabidopsis.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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  9. Mechanisms and rationales of SAM homeostasis.Trends in biochemical sciences · 2025
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  11. Targeting ROS in cancer: rationale and strategies.Nature reviews. Drug discovery · 2024
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  16. Mitohormesis.Cell metabolism · 2023
    Review
  17. Oxidative regulation of TDP-43 self-association by a β-to-α conformational switch.Proceedings of the National Academy of Sciences of the United States of America · 2023
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  19. A synergy between site-specific and transient interactions drives the phase separation of a disordered, low-complexity domain.Proceedings of the National Academy of Sciences of the United States of America · 2023
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  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Yu-San YangDepartment of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Masato KatoDepartment of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Xi WuDepartment of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Athanasios LitsiosMolecular Systems Biology, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Groningen 9747AG, the Netherlands.
Benjamin M SutterDepartment of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Yun WangDepartment of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Chien-Hsiang HsuSimmons Cancer Center, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA; Department of Pharmaceutical Chemistry, University of California, San Francisco, San Francisco, CA 94158, USA.
N Ezgi WoodDepartment of Cell Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Andrew LemoffDepartment of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Hamid MirzaeiDepartment of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Matthias HeinemannMolecular Systems Biology, Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Groningen 9747AG, the Netherlands.
Benjamin P TuDepartment of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA. Electronic address: benjamin.tu@utsouthwestern.edu.
The University of Texas Southwestern Medical Center · USUniversity of Groningen · NL

Funding

METABOLIC SIGNALS DRIVING CELL GROWTH & PROLIFERATIONR01GM094314 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI TU, BENJAMIN P · 2010 to 2019
$3.2M
Laser Scanning Confocal for UT Southwestern Live Cell Imaging FacilityS10OD021684 · OD · UT SOUTHWESTERN MEDICAL CENTER · PI LUBY-PHELPS, KATHERINE J · 2016 to 2016
$455k
Howard Hughes Medical InstituteNIGMS NIH HHS R01 GM094314NIH HHS S10 OD021684
6 · The paper itself

Abstract

Yeast ataxin-2, also known as Pbp1 (polyA binding protein-binding protein 1), is an intrinsically disordered protein implicated in stress granule formation, RNA biology, and neurodegenerative disease. To understand the endogenous function of this protein, we identify Pbp1 as a dedicated regulator of TORC1 signaling and autophagy under conditions that require mitochondrial respiration. Pbp1 binds to TORC1 specifically during respiratory growth, but utilizes an additional methionine-rich, low complexity (LC) region to inhibit TORC1. This LC region causes phase separation, forms reversible fibrils, and enables self-association into assemblies required for TORC1 inhibition. Mutants that weaken phase separation in vitro exhibit reduced capacity to inhibit TORC1 and induce autophagy. Loss of Pbp1 leads to mitochondrial dysfunction and reduced fitness during nutritional stress. Thus, Pbp1 forms a condensate in response to respiratory status to regulate TORC1 signaling.

Indexed as

Signal TransductionAmino Acid SequenceAutophagyCarrier ProteinsMechanistic Target of Rapamycin Complex 1MethionineMitochondriaMutagenesis, Site-DirectedPhosphorylationProtein BindingProtein DomainsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSirolimusCarrier ProteinsMechanistic Target of Rapamycin Complex 1MethioninePBP1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSirolimusAtaxin-2Autophagycross-βgelLow-complexity sequencemitochondriaPbp1phase separationpolymerrespirationTORC1

Identifiers

PMID30982600
PMCPMC6752053
OpenAlexW2936163503

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.