Evidence map›Paper›PMID 30980273›Full record

ArticleMolecular biology reports2019

In-silico analysis of novel p.(Gly14Ser) variant of ATOX1 gene: plausible role in modulating ATOX1-ATP7B interaction.

Niti Kumari, Aman Kumar, Amit Pal, Babu Ram Thapa, Manish Modi, Rajendra Prasad

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Article in Molecular biology reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Missing heritability of Wilson disease: a search for the uncharacterized mutations.Mammalian genome : official journal of the International Mammalian Genome Society · 2023
    Review
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Niti KumariDepartment of Biochemistry, PGIMER, Chandigarh, India.
Aman KumarDepartment of Biochemistry, PGIMER, Chandigarh, India.
Amit PalDepartment of Biochemistry, AIIMS, Jodhpur, Rajasthan, India.
Babu Ram ThapaDepartment of Pediatrics Gastroenterology, PGIMER, Chandigarh, India.
Manish ModiDepartment of Neurology, PGIMER, Chandigarh, India.
Rajendra PrasadDepartment of Biochemistry, PGIMER, Chandigarh, India. fateh1977@yahoo.com.ORCID http://orcid.org/0000-0002-7104-9077
Post Graduate Institute of Medical Education and Research · INAll India Institute of Medical Sciences Jodhpur · IN

Funding

Indian Council of Medical Research 3/1/3/JRF-2012/HRD-53Indian Council of Medical Research 54/1/2014-BMS
6 · The paper itself

Abstract

Clinical heterogeneity is commonly observed in Wilson disease (WD), including cases with identical ATP7B mutations. It is thought to be an outcome of impairment in other genes involved in cellular copper homeostasis in addition to the mutations in the ATP7B gene. ATOX1, a copper chaperone that delivers copper to ATP7B, is a potential genetic modifier of WD. In the present study, we analyzed the genetic variations in the ATOX1 gene in 50 WD patients and 60 controls. We identified four novel variants, of which, the coding region variant c.40G > A, p.(Gly14Ser) was observed in 2% alleles. Interestingly, p.(Gly14Ser) was seen with an early onset age, reduced serum ceruloplasmin level and manifestations of liver and brain in a WD patient unlike the other having identical ATP7B mutation but normal ATOX1 alleles. Further, computational analysis predicted that p.(Gly14Ser) substitution, in the critical copper binding motif (MXCXG

Indexed as

AdolescentAdultAllelesCase-Control StudiesCation Transport ProteinsChildChild, PreschoolComputer SimulationCopperCopper-Transporting ATPasesCopper Transport ProteinsFemaleGene FrequencyHepatolenticular DegenerationHumansIndiaATOX1 protein, humanATP7B protein, humanCation Transport ProteinsCopperCopper-Transporting ATPasesCopper Transport ProteinsMetallochaperonesMolecular ChaperonesATOX1ATP7BCu chaperoneModifierPhenotypeWilson disease

Identifiers

PMID30980273
OpenAlexW2938202386

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.