Evidence map›Paper›PMID 30980266›Full record

ArticleMolecular biology reports2019

Analysis of differential gene expression of the transgenic pig with overexpression of PGC1α in muscle.

Hao Gu, Jianan Li, Fei Ying, Bo Zuo, Zaiyan Xu

Abstract read
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In one paragraph

Article in Molecular biology reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.1field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 2 countries.

Hao GuKey Lab of Swine Genetics and Breeding of Ministry of Agriculture and Rural Affairs and Key Lab of Agricultural Animal Genetics and Breeding, Ministry of Education, College of Animal Science and Veterinary Medicine, Huazhong Agricultural University, Wuhan, 430070, People's Republic of China.
Jianan LiKey Lab of Swine Genetics and Breeding of Ministry of Agriculture and Rural Affairs and Key Lab of Agricultural Animal Genetics and Breeding, Ministry of Education, College of Animal Science and Veterinary Medicine, Huazhong Agricultural University, Wuhan, 430070, People's Republic of China.
Fei YingKey Lab of Swine Genetics and Breeding of Ministry of Agriculture and Rural Affairs and Key Lab of Agricultural Animal Genetics and Breeding, Ministry of Education, College of Animal Science and Veterinary Medicine, Huazhong Agricultural University, Wuhan, 430070, People's Republic of China.
Bo ZuoKey Lab of Swine Genetics and Breeding of Ministry of Agriculture and Rural Affairs and Key Lab of Agricultural Animal Genetics and Breeding, Ministry of Education, College of Animal Science and Veterinary Medicine, Huazhong Agricultural University, Wuhan, 430070, People's Republic of China.
Zaiyan XuKey Lab of Swine Genetics and Breeding of Ministry of Agriculture and Rural Affairs and Key Lab of Agricultural Animal Genetics and Breeding, Ministry of Education, College of Animal Science and Veterinary Medicine, Huazhong Agricultural University, Wuhan, 430070, People's Republic of China. 422929304@qq.com.ORCID http://orcid.org/0000-0001-9996-5424
Huazhong Agricultural University · CN

Funding

Fundamental Research Funds for the Central Universities 2662018PY037National Key Project for Transgenic Grants 2016ZX08006-002National Key Project for Transgenic Grants 2018ZX08010-12BThe Natural Science Foundation of Hubei Province 2018CFA015
6 · The paper itself

Abstract

In order to better understand the key regulatory mechanisms of PGC1α in muscle fiber type transition, the RNA-seq was used to compare the change of gene expression in gastrocnemius muscles between wild type pigs and transgenic pigs with overexpression of PGC1α gene in muscle. 371 differentially expressed genes (P ≤ 0.05 and Ratio ≥ 2), including 184 up-regulated genes and 187 down-regulated genes, were identified. Five main signaling pathways including metabolic pathways, ECM-receptor interaction, PPAR signaling pathway, adipocytokine signaling pathway and insulin signaling pathway, were authenticated using KEGG pathway analysis. Our results indicate that the fat metabolism pathway plays an important role in the transformation of muscle fiber types regulated by PGC1α.

Indexed as

AnimalsAnimals, Genetically ModifiedLipid MetabolismMeatMetabolic Networks and PathwaysMuscle Fibers, SkeletalMuscle, SkeletalPeroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alphaRNASignal TransductionSwineTranscriptomePeroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alphaRNAPGC1αRNA-seqTransgenic pig

Identifiers

PMID30980266
OpenAlexW2936517253

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.