Evidence map›Paper›PMID 30979906›Full record

ArticleNature communications2019

Plug-and-play metabolic transducers expand the chemical detection space of cell-free biosensors.

Peter L Voyvodic, Amir Pandi, Mathilde Koch, Ismael Conejero, Emmanuel Valjent, Philippe Courtet, Eric Renard, Jean-Loup Faulon, Jerome Bonnet

Abstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed.

  1. Article
  2. Article
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  4. Programming Next-Generation Synthetic Biosensors by Genetic Circuit Design.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Gene circuit-based sensors.Fundamental research · 2025
    Review
  11. Review
  12. Article
  13. Review
  14. Review
  15. Review
  16. Review
  17. Review
  18. A Microbial Cocaine Bioreporter.Sensors (Basel, Switzerland) · 2024
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Peter L VoyvodicCentre de Biochimie Structurale, INSERM U1054, CNRS UMR5048, University of Montpellier, Montpellier, 34090, France.
Amir PandiMicalis Institute, INRA, AgroParisTech, Université Paris-Saclay, Jouy-en-Josas, 78352, France.ORCID http://orcid.org/0000-0002-5204-756X
Mathilde KochMicalis Institute, INRA, AgroParisTech, Université Paris-Saclay, Jouy-en-Josas, 78352, France.
Ismael ConejeroCentre de Biochimie Structurale, INSERM U1054, CNRS UMR5048, University of Montpellier, Montpellier, 34090, France.
Emmanuel ValjentUMR CNRS 5203/INSERM U1191, Institute of Functional Genomics, University of Montpellier, Montpellier, 34090, France.ORCID http://orcid.org/0000-0002-1034-606X
Philippe CourtetINSERM U1061, Neuropsychiatry, Epidemiological and Clinical Research, Montpellier, 34093, France.ORCID http://orcid.org/0000-0002-6519-8586
Eric RenardUMR CNRS 5203/INSERM U1191, Institute of Functional Genomics, University of Montpellier, Montpellier, 34090, France.
Jean-Loup FaulonMicalis Institute, INRA, AgroParisTech, Université Paris-Saclay, Jouy-en-Josas, 78352, France. jean-loup.faulon@inra.fr.
Jerome BonnetCentre de Biochimie Structurale, INSERM U1054, CNRS UMR5048, University of Montpellier, Montpellier, 34090, France. jerome.bonnet@inserm.fr.ORCID http://orcid.org/0000-0002-8420-9359

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cell-free transcription-translation systems have great potential for biosensing, yet the range of detectable chemicals is limited. Here we provide a workflow to expand the range of molecules detectable by cell-free biosensors through combining synthetic metabolic cascades with transcription factor-based networks. These hybrid cell-free biosensors have a fast response time, strong signal response, and a high dynamic range. In addition, they are capable of functioning in a variety of complex media, including commercial beverages and human urine, in which they can be used to detect clinically relevant concentrations of small molecules. This work provides a foundation to engineer modular cell-free biosensors tailored for many applications.

Indexed as

Biosensing TechniquesCell-Free SystemBeveragesCampylobacter jejuniCocaineEscherichia coliHippuratesHumansMetabolic EngineeringRhodococcusSynthetic BiologyTransducersUrinalysisCocaineHippurateshippuric acid

Identifiers

PMID30979906
PMCPMC6461607

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.