Evidence map›Paper›PMID 30979884›Full record

ArticleNature communications2019

Altered steady state and activity-dependent de novo protein expression in fragile X syndrome.

Heather Bowling, Aditi Bhattacharya, Guoan Zhang, Danyal Alam, Joseph Z Lebowitz, Nathaniel Bohm-Levine, Derek Lin, Priyangvada Singha, Maggie Mamcarz, Rosemary Puckett and 7 more

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT06957054 (Assessment of Neural Biomarkers in Adult Subjects With Fragile X Syndrome and Typically Developing Subjects), which is not on this map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT06957054 completednot on this mapstarted 2024, after this paper: background citation

Assessment of Neural Biomarkers in Adult Subjects With Fragile X Syndrome and Typically Developing Subjects

TypeobservationalSponsorConnecta Therapeutics, S.L.Ran2024 to 2025Enrolled20ConditionsFragile X Syndrome (FXS), Neurotypical AdultsArmsAny
3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 34 citations in OpenAlex.

  1. Bioorthogonal Chemistry in Neurobiology: From Imaging to Proteomics.Chembiochem : a European journal of chemical biology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 3 institutions in 2 countries.

Heather BowlingCenter for Neural Science, New York University, New York, NY, 10003, USA.
Aditi BhattacharyaCenter for Neural Science, New York University, New York, NY, 10003, USA. aditi@instem.res.in.
Guoan ZhangSkirball Institute for Biomolecular Medicine and Department of Cell Biology, New York University School of Medicine, New York, NY, 10016, USA.
Danyal AlamCenter for Neural Science, New York University, New York, NY, 10003, USA.
Joseph Z LebowitzCenter for Neural Science, New York University, New York, NY, 10003, USA.
Nathaniel Bohm-LevineCenter for Neural Science, New York University, New York, NY, 10003, USA.ORCID http://orcid.org/0000-0001-6411-0805
Derek LinCenter for Neural Science, New York University, New York, NY, 10003, USA.
Priyangvada SinghaCentre for Brain Development and Repair, Institute for Stem Cell Biology and Regenerative Medicine, Bangalore, 560065, India.
Maggie MamcarzCenter for Neural Science, New York University, New York, NY, 10003, USA.
Rosemary PuckettCenter for Neural Science, New York University, New York, NY, 10003, USA.
Lili ZhouDepartment of Pediatrics, Rush University Medical Center, Chicago, IL, 60612, USA.
Sameer AryalCenter for Neural Science, New York University, New York, NY, 10003, USA.ORCID http://orcid.org/0000-0003-3577-4383
Kevin SharpDepartment of Pediatrics, Rush University Medical Center, Chicago, IL, 60612, USA.
Kent KirshenbaumDepartment of Chemistry, New York University, New York, NY, 10003, USA.
Elizabeth Berry-KravisDepartment of Pediatrics, Rush University Medical Center, Chicago, IL, 60612, USA.
Thomas A NeubertSkirball Institute for Biomolecular Medicine and Department of Cell Biology, New York University School of Medicine, New York, NY, 10016, USA.ORCID http://orcid.org/0000-0001-7049-2088
Eric KlannCenter for Neural Science, New York University, New York, NY, 10003, USA. eklann@cns.nyu.edu.
New York University · USRush University Medical Center · USInstitute for Stem Cell Biology and Regenerative Medicine · IN

Funding

Strategies to rescue PI3K dysregulation in Fragile X SyndromeU54HD082013 · NICHD · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI RICHTER, JOEL D · 2014 to 2019
$10.2M
Protein Mass Spectrometry Core Facility for NeuroscienceP30NS050276 · NINDS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI NEUBERT, THOMAS A · 2005 to 2015
$7.9M
Translation Regulation in Hippocampal LTP and LTDR01NS047384 · NINDS · NEW YORK UNIVERSITY · PI KLANN, ERIC · 2005 to 2020
$5.2M
Reactive Oxygen Species Signaling in the HippocampusR01NS034007 · NINDS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KLANN, ERIC · 2000 to 2012
$4.2M
eIF2alpha Phosphorylation in Synaptic Plasticity, Memory, and Brain DisordersR37NS034007 · NINDS · NEW YORK UNIVERSITY · PI KLANN, ERIC · 2014 to 2020
$3.3M
LTQ-Orbitrap Mass Spectrometer.S10RR027990 · NCRR · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI NEUBERT, THOMAS A · 2011 to 2011
$600k
OXIDATIVE ACTIVATION OF PKC DURING INDUCTION OF LTPR29NS034007 · NINDS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KLANN, ERIC · 1995 to 1999
–
National Science Foundation CHE-1507946NCRR NIH HHS S10 RR027990NICHD NIH HHS U54 HD082013NINDS NIH HHS P30 NS050276NINDS NIH HHS R01 NS034007NINDS NIH HHS R01 NS047384NINDS NIH HHS R29 NS034007NINDS NIH HHS R37 NS034007
6 · The paper itself

Abstract

Whether fragile X mental retardation protein (FMRP) target mRNAs and neuronal activity contributing to elevated basal neuronal protein synthesis in fragile X syndrome (FXS) is unclear. Our proteomic experiments reveal that the de novo translational profile in FXS model mice is altered at steady state and in response to metabotropic glutamate receptor (mGluR) stimulation, but the proteins expressed differ under these conditions. Several altered proteins, including Hexokinase 1 and Ras, also are expressed in the blood of FXS model mice and pharmacological treatments previously reported to ameliorate phenotypes modify their abundance in blood. In addition, plasma levels of Hexokinase 1 and Ras differ between FXS patients and healthy volunteers. Our data suggest that brain-based de novo proteomics in FXS model mice can be used to find altered expression of proteins in blood that could serve as disease-state biomarkers in individuals with FXS.

Indexed as

AdolescentAdultAnimalsBiomarkersDisease Models, AnimalFemaleFragile X SyndromeHexokinaseHippocampusHumansMaleMiceMice, Inbred C57BLMice, KnockoutPhenotyperas ProteinsBiomarkersHexokinasemetabotropic glutamate receptor type 1ras ProteinsReceptors, Metabotropic Glutamate

Identifiers

PMID30979884
PMCPMC6461708
OpenAlexW2936407216

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.