Evidence map›Paper›PMID 30979841›Full record

ArticleApplied and environmental microbiology2019

Wetland Sediments Host Diverse Microbial Taxa Capable of Cycling Alcohols.

Paula Dalcin Martins, Jeroen Frank, Hugh Mitchell, Lye Meng Markillie, Michael J Wilkins

Open access · hybridAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. The dynamic history of prokaryotic phyla: discovery, diversity and division.International journal of systematic and evolutionary microbiology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Paula Dalcin MartinsDepartment of Microbiology, Radboud University Nijmegen, Nijmegen, The Netherlands.ORCID 0000-0003-1242-0267
Jeroen FrankDepartment of Microbiology, Radboud University Nijmegen, Nijmegen, The Netherlands.
Hugh MitchellPacific Northwest National Laboratory, Richland, Washington, USA.
Lye Meng MarkilliePacific Northwest National Laboratory, Richland, Washington, USA.
Michael J WilkinsDepartment of Soil and Crop Sciences, Colorado State University, Fort Collins, Colorado, USA Mike.Wilkins@ColoState.edu.
Pacific Northwest National Laboratory · USRadboud University Nijmegen · NLColorado State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alcohols are commonly derived from the degradation of organic matter and yet are rarely measured in environmental samples. Wetlands in the Prairie Pothole Region (PPR) support extremely high methane emissions and the highest sulfate reduction rates reported to date, likely contributing to a significant proportion of organic matter mineralization in this system. While ethanol and isopropanol concentrations up to 4 to 5 mM in PPR wetland pore fluids have been implicated in sustaining these high rates of microbial activity, the mechanisms that support alcohol cycling in this ecosystem are poorly understood. We leveraged metagenomic and transcriptomic tools to identify genes, pathways, and microorganisms potentially accounting for alcohol cycling in PPR wetlands. Phylogenetic analyses revealed diverse alcohol dehydrogenases and putative substrates. Alcohol dehydrogenase and aldehyde dehydrogenase genes were included in 62 metagenome-assembled genomes (MAGs) affiliated with 16 phyla. The most frequently encoded pathway (in 30 MAGs) potentially accounting for alcohol production was a

Indexed as

AlcoholsArchaeaBacteriaGeologic SedimentsMetagenomeMicrobiotaNorth DakotaSequence Analysis, DNAWetlandsAlcoholsalcohol cyclingfermentationorganic matter degradationsedimentswetlands

Identifiers

PMID30979841
PMCPMC6544822
OpenAlexW2939322134

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.