Evidence map›Paper›PMID 30979724›Full record

ArticleThe Journal of biological chemistry2019

X-ray radiolytic labeling reveals the molecular basis of orange carotenoid protein photoprotection and its interactions with fluorescence recovery protein.

Sayan Gupta, Markus Sutter, Soumya G Remesh, Maria Agustina Dominguez-Martin, Han Bao, Xinyu A Feng, Leanne-Jade G Chan, Christopher J Petzold, Cheryl A Kerfeld, Corie Y Ralston

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 35 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. A favorable path to domain separation in the orange carotenoid protein.Protein science : a publication of the Protein Society · 2022
    Article
  10. Integrated Structural Studies for Elucidating Carotenoid-Protein Interactions.Advances in experimental medicine and biology · 2022
    Article
  11. Article
  12. Article
  13. Fluorescence recovery protein: a powerful yet underexplored regulator of photoprotection in cyanobacteria†.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2020
    Review
  14. Article
  15. Article
  16. Introducing anFrontiers in plant science · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 3 countries.

Sayan GuptaFrom the Molecular Biophysics and Integrated Bioimaging Division.
Markus SutterFrom the Molecular Biophysics and Integrated Bioimaging Division.ORCID 0000-0001-6290-4820
Soumya G RemeshFrom the Molecular Biophysics and Integrated Bioimaging Division.
Maria Agustina Dominguez-Martinthe MSU-DOE Plant Research Laboratory and Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824.
Han Baothe MSU-DOE Plant Research Laboratory and Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan 48824.
Xinyu A FengFrom the Molecular Biophysics and Integrated Bioimaging Division.
Leanne-Jade G Chanthe Biological Systems and Engineering Divisions, Lawrence Berkeley National Laboratory, Berkeley, California 94720 and.
Christopher J Petzoldthe Biological Systems and Engineering Divisions, Lawrence Berkeley National Laboratory, Berkeley, California 94720 and.
Cheryl A KerfeldFrom the Molecular Biophysics and Integrated Bioimaging Division, ckerfeld@lbl.gov.
Corie Y RalstonFrom the Molecular Biophysics and Integrated Bioimaging Division, cyralston@lbl.gov.
Lawrence Berkeley National Laboratory · USMichigan State University · US

Funding

Development of high-dose time-resolved x-ray footprinting technologies to enable the next level of structural analysis for challenging biological problemsR01GM126218 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI RALSTON, CORIE Y · 2018 to 2025
$3.4M
NIGMS NIH HHS R01 GM126218
6 · The paper itself

Abstract

In cyanobacterial photoprotection, the orange carotenoid protein (OCP) is photoactivated under excess light conditions and binds to the light-harvesting antenna, triggering the dissipation of captured light energy. In low light, the OCP relaxes to the native state, a process that is accelerated in the presence of fluorescence recovery protein (FRP). Despite the importance of the OCP in photoprotection, the precise mechanism of photoactivation by this protein is not well-understood. Using time-resolved X-ray-mediated

Indexed as

Bacterial ProteinsCarotenoidsCyanobacteriaHydroxyl RadicalMolecular Docking SimulationProtein Structure, TertiaryX-RaysBacterial ProteinsCarotenoidsHydroxyl Radicalcarotenoidcarotenoid chromophorefluorescence recovery proteinmass spectrometry (MS)orange carotenoid proteinphotosynthetic pigmentprotein complexprotein conformationtime-resolved X-ray footprinting

Identifiers

PMID30979724
PMCPMC6552439
OpenAlexW2939963599

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.