Evidence map›Paper›PMID 30977365›Full record

ArticleBiochemistry2019

Rapid Deorphanization of Human Olfactory Receptors in Yeast.

Emily A Yasi, Sara L Eisen, Hanfei Wang, Widianti Sugianto, Anita R Minniefield, Kaitlyn A Hoover, Paul J Branham, Pamela Peralta-Yahya

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
2.2field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 35 citations in OpenAlex.

  1. Microbial volatile organic compounds and olfactory receptors in wound malodor.Frontiers in cellular and infection microbiology · 2026
    Pooled it
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Recovery of the histamine HScientific reports · 2023
    Article
  9. Review
  10. Article
  11. A Toolkit for Precise, Multigene Control inACS synthetic biology · 2022
    Article
  12. Article
  13. Article
  14. Article
  15. Review
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  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Emily A YasiSchool of Chemistry and Biochemistry , Georgia Institute of Technology , Atlanta , Georgia 30332 , United States.
Sara L EisenSchool of Chemistry and Biochemistry , Georgia Institute of Technology , Atlanta , Georgia 30332 , United States.
Hanfei WangSchool of Chemistry and Biochemistry , Georgia Institute of Technology , Atlanta , Georgia 30332 , United States.
Widianti SugiantoSchool of Chemistry and Biochemistry , Georgia Institute of Technology , Atlanta , Georgia 30332 , United States.
Anita R MinniefieldSchool of Chemistry and Biochemistry , Georgia Institute of Technology , Atlanta , Georgia 30332 , United States.
Kaitlyn A HooverSchool of Chemistry and Biochemistry , Georgia Institute of Technology , Atlanta , Georgia 30332 , United States.
Paul J BranhamSchool of Chemistry and Biochemistry , Georgia Institute of Technology , Atlanta , Georgia 30332 , United States.
Pamela Peralta-YahyaSchool of Chemistry and Biochemistry , Georgia Institute of Technology , Atlanta , Georgia 30332 , United States.ORCID 0000-0002-0356-2274
Georgia Institute of Technology · US

Funding

Olfactory receptor-based sensors for biomedical applicationsR35GM124871 · NIGMS · GEORGIA INSTITUTE OF TECHNOLOGY · PI Pamela Peralta-Yahya · 2017 to 2026
$3.6M
NIGMS NIH HHS R35 GM124871
6 · The paper itself

Abstract

Olfactory receptors are ectopically expressed (exORs) in more than 16 different tissues. Studying the role of exORs is hindered by the lack of known ligands that activate these receptors. Of particular interest are exORs in the colon, the section of the gastrointestinal tract with the greatest diversity of microbiota where ORs may be participating in host-microbiome communication. Here, we leverage a G-protein-coupled receptor (GPCR)-based yeast sensor strain to generate sensors for seven ORs highly expressed in the colon. We screen the seven colon ORs against 57 chemicals likely to bind ORs in olfactory tissue. We successfully deorphanize two colon exORs for the first time, OR2T4 and OR10S1, and find alternative ligands for OR2A7. The same OR deorphanization workflow can be applied to the deorphanization of other ORs and GPCRs in general. Identification of ligands for OR2T4, OR10S1, and OR2A7 will enable the study of these ORs in the colon. Additionally, the colon OR-based sensors will enable the elucidation of endogenous colon metabolites that activate these receptors. Finally, deorphanization of OR2T4 and OR10S1 supports studies of the neuroscience of olfaction.

Indexed as

ColonGreen Fluorescent ProteinsHumansLigandsMicrobiotaProtein BindingReceptors, G-Protein-CoupledReceptors, OdorantSaccharomyces cerevisiaeGreen Fluorescent ProteinsLigandsReceptors, G-Protein-CoupledReceptors, Odorant

Identifiers

PMID30977365
PMCPMC6482435
OpenAlexW2935685440

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.