Evidence map›Paper›PMID 30977234›Full record

ArticleProtein science : a publication of the Protein Society2019

Electron-deficient p-benzoyl-l-phenylalanine derivatives increase covalent chemical capture yields for protein-protein interactions.

Cassandra M Joiner, Meghan E Breen, Anna K Mapp

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Peptide modificationChemical science · 2026
    Article
  2. Review
  3. Review
  4. Reading and Writing the Ubiquitin Code Using Genetic Code Expansion.Chembiochem : a European journal of chemical biology · 2024
    Review
  5. Review
  6. Article
  7. Non-canonical Amino Acid Substrates of E. coli Aminoacyl-tRNA Synthetases.Chembiochem : a European journal of chemical biology · 2022
    Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Cassandra M JoinerDepartment of Chemistry, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0003-0476-9418
Meghan E BreenLife Sciences Institute, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0003-1568-8533
Anna K MappDepartment of Chemistry, University of Michigan, Ann Arbor, Michigan.ORCID 0000-0003-0791-8327

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

The photoactivatable amino acid p-benzoyl-l-phenylalanine (pBpa) has been used for the covalent capture of protein-protein interactions (PPIs) in vitro and in living cells. However, this technique often suffers from poor photocrosslinking yields due to the low reactivity of the active species. Here we demonstrate that the incorporation of halogenated pBpa analogs into proteins leads to increased crosslinking yields for protein-protein interactions. The analogs can be incorporated into live yeast and upon irradiation capture endogenous PPIs. Halogenated pBpas will extend the scope of PPIs that can be captured and expand the toolbox for mapping PPIs in their native environment.

Indexed as

BenzophenonesCross-Linking ReagentsElectronsMolecular StructurePhenylalanineProtein BindingSaccharomyces cerevisiae Proteins4-benzoylphenylalanineBenzophenonesCross-Linking ReagentsPhenylalanineSaccharomyces cerevisiae Proteinscovalent chemical capturep-benzoyl-l-phenylalaninephotocrosslinkingprotein-protein interactions

Identifiers

PMID30977234
PMCPMC6511736

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.