Evidence map›Paper›PMID 30976000›Full record

ArticleNature communications2019

Conformational dynamics of the human serotonin transporter during substrate and drug binding.

Ingvar R Möller, Marika Slivacka, Anne Kathrine Nielsen, Søren G F Rasmussen, Ulrik Gether, Claus J Loland, Kasper D Rand

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
6.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 90 citations in OpenAlex.

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  11. Integrated AlphaFold2 and DEER investigation of the conformational dynamics of a pH-dependent APC antiporter.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  12. Article
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  20. Novel Molecular Targets of Antidepressants.Molecules (Basel, Switzerland) · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Ingvar R MöllerProtein Analysis Group, Department of Pharmacy, University of Copenhagen, Copenhagen, 2100, Denmark.ORCID http://orcid.org/0000-0003-4497-2955
Marika SlivackaProtein Analysis Group, Department of Pharmacy, University of Copenhagen, Copenhagen, 2100, Denmark.
Anne Kathrine NielsenLaboratory for Membrane Protein Dynamics, Department of Neuroscience, University of Copenhagen, Copenhagen, 2200, Denmark.ORCID http://orcid.org/0000-0002-6627-3330
Søren G F RasmussenDepartment of Neuroscience, University of Copenhagen, Copenhagen, 2200, Denmark.
Ulrik GetherDepartment of Neuroscience, University of Copenhagen, Copenhagen, 2200, Denmark.ORCID http://orcid.org/0000-0002-0020-3807
Claus J LolandLaboratory for Membrane Protein Dynamics, Department of Neuroscience, University of Copenhagen, Copenhagen, 2200, Denmark. cllo@sund.ku.dk.ORCID http://orcid.org/0000-0002-1773-1446
Kasper D RandProtein Analysis Group, Department of Pharmacy, University of Copenhagen, Copenhagen, 2100, Denmark. kasper.rand@sund.ku.dk.ORCID http://orcid.org/0000-0002-6337-5489
University of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The serotonin transporter (SERT), a member of the neurotransmitter:sodium symporter family, is responsible for termination of serotonergic signaling by re-uptake of serotonin (5-HT) into the presynaptic neuron. Its key role in synaptic transmission makes it a major drug target, e.g. for the treatment of depression, anxiety and post-traumatic stress. Here, we apply hydrogen-deuterium exchange mass spectrometry to probe the conformational dynamics of human SERT in the absence and presence of known substrates and targeted drugs. Our results reveal significant changes in dynamics in regions TM1, EL3, EL4, and TM12 upon binding co-transported ions (Na

Indexed as

Protein DomainsCations, MonovalentCitalopramCocaineIbogaineLigandsMass SpectrometryMolecular Dynamics SimulationPotassiumProtein BindingRecombinant ProteinsSerotoninSerotonin Plasma Membrane Transport ProteinsSodiumStructure-Activity RelationshipCations, MonovalentCitalopramCocaineIbogaineLigandsPotassiumRecombinant ProteinsSerotoninSerotonin Plasma Membrane Transport ProteinsSLC6A4 protein, humanSodium

Identifiers

PMID30976000
PMCPMC6459873
OpenAlexW2940171600

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.