Evidence map›Paper›PMID 30975454›Full record

ArticleBiophysical journal2019

Multiple CheY Homologs Control Swimming Reversals and Transient Pauses in Azospirillum brasilense.

Tanmoy Mukherjee, Mustafa Elmas, Lam Vo, Vasilios Alexiades, Tian Hong, Gladys Alexandre

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

  1. c-di-GMP-mediated pause behavior enablesApplied and environmental microbiology · 2026
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  4. Genome analysis of a halophilicFrontiers in microbiology · 2023
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  5. Vibrio cholerae Motility in Aquatic and Mucus-Mimicking Environments.Applied and environmental microbiology · 2021
    Article
  6. The Divergent Key Residues of TwoMicroorganisms · 2021
    Article
  7. ThemSystems · 2021
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  8. Article
  9. Review
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  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Tanmoy MukherjeeDepartment of Biochemistry and Cellular and Molecular Biology, University of Tennessee, Knoxville, Tennessee.
Mustafa ElmasDepartment of Mathematics, University of Tennessee, Knoxville, Tennessee.
Lam VoDepartment of Biochemistry and Cellular and Molecular Biology, University of Tennessee, Knoxville, Tennessee.
Vasilios AlexiadesDepartment of Mathematics, University of Tennessee, Knoxville, Tennessee.
Tian HongDepartment of Biochemistry and Cellular and Molecular Biology, University of Tennessee, Knoxville, Tennessee; National Institute for Mathematical and Biological Synthesis, University of Tennessee, Knoxville, Tennessee.
Gladys AlexandreDepartment of Biochemistry and Cellular and Molecular Biology, University of Tennessee, Knoxville, Tennessee. Electronic address: galexan2@utk.edu.
University of Tennessee at Knoxville · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chemotaxis, together with motility, helps bacteria foraging in their habitat. Motile bacteria exhibit a variety of motility patterns, often controlled by chemotaxis, to promote dispersal. Motility in many bacteria is powered by a bidirectional flagellar motor. The flagellar motor has been known to briefly pause during rotation because of incomplete reversals or stator detachment. Transient pauses were previously observed in bacterial strains lacking CheY, and these events could not be explained by incomplete motor reversals or stator detachment. Here, we systematically analyzed swimming trajectories of various chemotaxis mutants of the monotrichous soil bacterium, Azospirillum brasilense. Like other polar flagellated bacterium, the main swimming pattern in A. brasilense is run and reverse. A. brasilense also uses run-pauses and putative run-reverse-flick-like swimming patterns, although these are rare events. A. brasilense mutant derivatives lacking the chemotaxis master histidine kinase, CheA4, or the central response regulator, CheY7, also showed transient pauses. Strikingly, the frequency of transient pauses increased dramatically in the absence of CheY4. Our findings collectively suggest that reversals and pauses are controlled through signaling by distinct CheY homologs, and thus are likely to be functionally important in the lifestyle of this soil organism.

Indexed as

ChemotaxisSequence Homology, Amino AcidAmino Acid SequenceAzospirillum brasilenseBacterial ProteinsRotationSwimmingBacterial Proteins

Identifiers

PMID30975454
PMCPMC6486476
OpenAlexW2924524948

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.