Evidence map›Paper›PMID 30974617›Full record

ArticlePolymers2016

Particle-Based Modeling of Living Actin Filaments in an Optical Trap.

Thomas A Hunt, Santosh Mogurampelly, Giovanni Ciccotti, Carlo Pierleoni, Jean-Paul Ryckaert

Abstract read
In one paragraph

Article in Polymers, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Thomas A HuntD3-Computation, Istituto Italiano di Tecnologia, via Morego 30, Genova 16163, Italy. tomahunt@gmail.com.
Santosh MogurampellyDepartment of Chemical Engineering, University of Texas at Austin, Austin, TX 78712, USA. santoshcup6@gmail.com.
Giovanni CiccottiIAC, CNR, Via dei Taurini, Rome 00185, Italy. giovanni.ciccotti@roma1.infn.it.
Carlo PierleoniDepartment of Physical and Chemical Sciences, University of L'Aquila, Via Vetoio 10, L'Aquila 67100, Italy. carlo.pierleoni@aquila.infn.it.ORCID 0000-0001-9188-3846
Jean-Paul RyckaertDepartment of Physics, Université Libre de Bruxelles (ULB), Campus Plaine, CP 223, Brussels B-1050, Belgium. jryckaer@ulb.ac.be.

Funding

IIT Seed-259Italian Ministry of Education and Research PRIN2012NNRKAF
6 · The paper itself

Abstract

We report a coarse-grained molecular dynamics simulation study of a bundle of parallel actin filaments under supercritical conditions pressing against a loaded mobile wall using a particle-based approach where each particle represents an actin unit. The filaments are grafted to a fixed wall at one end and are reactive at the other end, where they can perform single monomer (de)polymerization steps and push on a mobile obstacle. We simulate a reactive grand canonical ensemble in a box of fixed transverse area

Indexed as

actin networksbiofilamentsmolecular simulation

Identifiers

PMID30974617
PMCPMC6432230

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.