Evidence map›Paper›PMID 30972331›Full record

ArticleFrontiers in bioengineering and biotechnology2019

Bio-ModelChecker: Using Bounded Constraint Satisfaction to Seamlessly Integrate Observed Behavior With Prior Knowledge of Biological Networks.

Hooman Sedghamiz, Matthew Morris, Travis J A Craddock, Darrell Whitley, Gordon Broderick

Abstract read
In one paragraph

Article in Frontiers in bioengineering and biotechnology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
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  7. Verifiable biology.Journal of the Royal Society, Interface · 2023
    Review
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Hooman SedghamizCenter for Clinical Systems Biology, Rochester General Hospital, Rochester, NY, United States.
Matthew MorrisCenter for Clinical Systems Biology, Rochester General Hospital, Rochester, NY, United States.
Travis J A CraddockInstitute for Neuro Immune Medicine, Nova Southeastern University, Fort Lauderdale, FL, United States.
Darrell WhitleySchool of Computer Science, Colorado State University, Fort Collins, CO, United States.
Gordon BroderickCenter for Clinical Systems Biology, Rochester General Hospital, Rochester, NY, United States.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The

Indexed as

constraint satisfactiondata compliancemulti-objectivemulti-valued discrete logicpath robustnessregulatory networkstransition efficiency

Identifiers

PMID30972331
PMCPMC6443719

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.