Evidence map›Paper›PMID 30971696›Full record

ArticleNature communications2019

Mechanisms of redundancy and specificity of the Aspergillus fumigatus Crh transglycosylases.

Wenxia Fang, Ana Belén Sanz, Sergio Galan Bartual, Bin Wang, Andrew T Ferenbach, Vladimír Farkaš, Ramon Hurtado-Guerrero, Javier Arroyo, Daan M F van Aalten

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 41 citations in OpenAlex.

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  6. Optimization of Protoplast Preparation Conditions inJournal of fungi (Basel, Switzerland) · 2024
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  8. Inhibitory Effect of L-Methionine onJournal of fungi (Basel, Switzerland) · 2024
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  9. UnderstandingCell surface (Amsterdam, Netherlands) · 2023
    Review
  10. Characterization ofCell surface (Amsterdam, Netherlands) · 2022
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. A seven-membered cell wall related transglycosylase gene family inCell surface (Amsterdam, Netherlands) · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 4 countries.

Wenxia FangSchool of Life Sciences, University of Dundee, Dundee, DD1 5EH, UK.
Ana Belén SanzDepartamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad Complutense de Madrid, IRYCIS, 28040, Madrid, Spain.
Sergio Galan BartualSchool of Life Sciences, University of Dundee, Dundee, DD1 5EH, UK.
Bin WangNational Engineering Research Center for Non-Food Biorefinery, State Key Laboratory of Non-Food Biomass and Enzyme Technology, Guangxi Academy of Sciences, 530007, Nanning, China.
Andrew T FerenbachSchool of Life Sciences, University of Dundee, Dundee, DD1 5EH, UK.
Vladimír FarkašDepartment of Glycobiology, Institute of Chemistry, Center for Glycomics, Slovak Academy of Sciences, 84538, Bratislava, Slovakia.
Ramon Hurtado-GuerreroInstitute of Biocomputation and Physics of Complex Systems (BIFI), University of Zaragoza, BIFI-IQFR (CSIC), 50018, Zaragoza, Spain.ORCID http://orcid.org/0000-0002-3122-9401
Javier ArroyoDepartamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad Complutense de Madrid, IRYCIS, 28040, Madrid, Spain. jarroyo@ucm.es.
Daan M F van AaltenSchool of Life Sciences, University of Dundee, Dundee, DD1 5EH, UK. dmfvanaalten@dundee.ac.uk.ORCID http://orcid.org/0000-0002-1499-6908
University of Dundee · GBUniversidad Complutense de Madrid · ESGuangxi Academy of Sciences · CNInstitute of Chemistry of the Slovak Academy of Sciences · SKUniversidad de Zaragoza · ES

Funding

Medical Research Council MR/M004139/1
6 · The paper itself

Abstract

Fungal cell wall synthesis is achieved by a balance of glycosyltransferase, hydrolase and transglycosylase activities. Transglycosylases strengthen the cell wall by forming a rigid network of crosslinks through mechanisms that remain to be explored. Here we study the function of the Aspergillus fumigatus family of five Crh transglycosylases. Although crh genes are dispensable for cell viability, simultaneous deletion of all genes renders cells sensitive to cell wall interfering compounds. In vitro biochemical assays and localisation studies demonstrate that this family of enzymes functions redundantly as transglycosylases for both chitin-glucan and chitin-chitin cell wall crosslinks. To understand the molecular basis of this acceptor promiscuity, we solved the crystal structure of A. fumigatus Crh5 (AfCrh5) in complex with a chitooligosaccharide at the resolution of 2.8 Å, revealing an extensive elongated binding cleft for the donor (-4 to -1) substrate and a short acceptor (+1 to +2) binding site. Together with mutagenesis, the structure suggests a "hydrolysis product assisted" molecular mechanism favouring transglycosylation over hydrolysis.

Indexed as

Aspergillus fumigatusbeta-GlucansBinding SitesCell WallChitinCrystallography, X-RayFungal ProteinsGene Knockdown TechniquesGlycosyltransferasesMutagenesis, Site-DirectedProtein DomainsSubstrate Specificitybeta-GlucansChitinFungal ProteinsGlycosyltransferases

Identifiers

PMID30971696
PMCPMC6458159
OpenAlexW2939287708

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.