Evidence map›Paper›PMID 30971684›Full record

ArticleNature communications2019

Multicolor multiscale brain imaging with chromatic multiphoton serial microscopy.

Lamiae Abdeladim, Katherine S Matho, Solène Clavreul, Pierre Mahou, Jean-Marc Sintes, Xavier Solinas, Ignacio Arganda-Carreras, Stephen G Turney, Jeff W Lichtman, Anatole Chessel and 5 more

Erratum issuedAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed.

  1. Article
  2. Multicolor Cell Lineage Tracing Using MAGIC Markers Strategies.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
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  14. Modern Microscopic Approaches to Astrocytes.International journal of molecular sciences · 2023
    Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Multiple forms of working memory emerge from synapse-astrocyte interactions in a neuron-glia network model.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

Lamiae AbdeladimLaboratory for Optics and Biosciences, Ecole polytechnique, CNRS, INSERM, IP Paris, Palaiseau, 91128, France.
Katherine S MathoLaboratory for Optics and Biosciences, Ecole polytechnique, CNRS, INSERM, IP Paris, Palaiseau, 91128, France.
Solène ClavreulSorbonne Université, INSERM, CNRS, Institut de la Vision, 17 rue Moreau, Paris, 75012, France.ORCID http://orcid.org/0000-0001-5384-8425
Pierre MahouLaboratory for Optics and Biosciences, Ecole polytechnique, CNRS, INSERM, IP Paris, Palaiseau, 91128, France.
Jean-Marc SintesLaboratory for Optics and Biosciences, Ecole polytechnique, CNRS, INSERM, IP Paris, Palaiseau, 91128, France.
Xavier SolinasLaboratory for Optics and Biosciences, Ecole polytechnique, CNRS, INSERM, IP Paris, Palaiseau, 91128, France.
Ignacio Arganda-CarrerasDepartment of Computer Science and Artificial Intelligence, University of the Basque Country, San Sebastian, 20018, Spain.ORCID http://orcid.org/0000-0003-0229-5722
Stephen G TurneyCenter for Brain Science and Department of Molecular and Cellular Biology, Harvard University, Cambridge, 02138, MA, USA.
Jeff W LichtmanCenter for Brain Science and Department of Molecular and Cellular Biology, Harvard University, Cambridge, 02138, MA, USA.ORCID http://orcid.org/0000-0002-0208-3212
Anatole ChesselLaboratory for Optics and Biosciences, Ecole polytechnique, CNRS, INSERM, IP Paris, Palaiseau, 91128, France.ORCID http://orcid.org/0000-0002-1326-6305
Alexis-Pierre BemelmansNeurodegenerative Diseases Laboratory, Molecular Imaging Research Center, Institut de Biologie François Jacob, CEA, CNRS, Université Paris-Sud, Fontenay-aux-Roses, 92265, France.ORCID http://orcid.org/0000-0001-7605-5225
Karine LoulierSorbonne Université, INSERM, CNRS, Institut de la Vision, 17 rue Moreau, Paris, 75012, France.ORCID http://orcid.org/0000-0001-6216-2708
Willy SupattoLaboratory for Optics and Biosciences, Ecole polytechnique, CNRS, INSERM, IP Paris, Palaiseau, 91128, France.
Jean LivetSorbonne Université, INSERM, CNRS, Institut de la Vision, 17 rue Moreau, Paris, 75012, France. jean.livet@inserm.fr.ORCID http://orcid.org/0000-0003-3079-4908
Emmanuel BeaurepaireLaboratory for Optics and Biosciences, Ecole polytechnique, CNRS, INSERM, IP Paris, Palaiseau, 91128, France. emmanuel.beaurepaire@polytechnique.edu.ORCID http://orcid.org/0000-0002-2082-8214

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Large-scale microscopy approaches are transforming brain imaging, but currently lack efficient multicolor contrast modalities. We introduce chromatic multiphoton serial (ChroMS) microscopy, a method integrating one-shot multicolor multiphoton excitation through wavelength mixing and serial block-face image acquisition. This approach provides organ-scale micrometric imaging of spectrally distinct fluorescent proteins and label-free nonlinear signals with constant micrometer-scale resolution and sub-micron channel registration over the entire imaged volume. We demonstrate tridimensional (3D) multicolor imaging over several cubic millimeters as well as brain-wide serial 2D multichannel imaging. We illustrate the strengths of this method through color-based 3D analysis of astrocyte morphology and contacts in the mouse cerebral cortex, tracing of individual pyramidal neurons within densely Brainbow-labeled tissue, and multiplexed whole-brain mapping of axonal projections labeled with spectrally distinct tracers. ChroMS will be an asset for multiscale and system-level studies in neuroscience and beyond.

Indexed as

AnimalsAstrocytesCerebral CortexColorDependovirusFemaleGenetic VectorsHEK293 CellsHumansImaging, Three-DimensionalLuminescent ProteinsMiceMice, Inbred C57BLMice, TransgenicMicroscopy, Fluorescence, MultiphotonModels, AnimalLuminescent ProteinsNes protein, mouseNestin

Identifiers

PMID30971684
PMCPMC6458155

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.