Evidence map›Paper›PMID 30968308›Full record

ArticlePlant molecular biology2019

The Arabidopsis splicing regulator SR45 confers salt tolerance in a splice isoform-dependent manner.

Mohammed Albaqami, K Laluk, Anireddy S N Reddy

Abstract read
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In one paragraph

Article in Plant molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 69 citations in OpenAlex.

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  6. Genome-Wide Isoform Switching Reveals SR45-Mediated Splicing Control ofInternational journal of molecular sciences · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Mohammed AlbaqamiDepartment of Biology and Program in Cell and Molecular Biology, Colorado State University, Fort Collins, CO, 80523, USA.
K LalukDepartment of Biology and Program in Cell and Molecular Biology, Colorado State University, Fort Collins, CO, 80523, USA.
Anireddy S N ReddyDepartment of Biology and Program in Cell and Molecular Biology, Colorado State University, Fort Collins, CO, 80523, USA. reddy@colostate.edu.
Colorado State University · US

Funding

National Science Foundation ABI 0743097
6 · The paper itself

Abstract

key messageFunctions of most splice isoforms that are generated by alternative splicing are unknown. We show that two splice variants that encode proteins differing in only eight amino acids have distinct functions in a stress response. Serine/arginine-rich (SR) and SR-like proteins, a conserved family of RNA binding proteins across eukaryotes, play important roles in pre-mRNA splicing and other post-transcriptional processes. Pre-mRNAs of SR and SR-like proteins undergo extensive alternative splicing in response to diverse stresses and produce multiple splice isoforms. However, the functions of most splice isoforms remain elusive. Alternative splicing of pre-mRNA of Arabidopsis SR45, which encodes an SR-like splicing regulator, generates two isoforms (long-SR45.1 and short-SR45.2). The proteins encoded by these two isoforms differ in eight amino acids. Here, we investigated the role of SR45 and its splice variants in salt stress tolerance. The loss of SR45 resulted in enhanced sensitivity to salt stress and changes in expression and splicing of genes involved in regulating salt stress response. Interestingly, only the long isoform (SR45.1) rescued the salt-sensitive phenotype as well as the altered gene expression and splicing patterns in the mutant. These results suggest that SR45 positively regulates salt tolerance. Furthermore, only the long isoform is required for SR45-mediated salt tolerance.

Indexed as

Alternative SplicingArabidopsisArabidopsis ProteinsHomeostasisProtein IsoformsRNA-Binding ProteinsSalt ToleranceSignal TransductionStress, PhysiologicalArabidopsis ProteinsProtein IsoformsRNA-Binding ProteinsSR45 protein, ArabidopsisAbiotic stressArabidopsisPre-mRNA splicingSalt stressSplice isoformSR45Stress-responsive genes

Identifiers

PMID30968308
OpenAlexW2937509035

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.