Evidence map›Paper›PMID 30968248›Full record

ArticleMolecular genetics and genomics : MGG2019

Insufficient evidence for a role of SERPINF1 in otosclerosis.

Hanne Valgaeren, Manou Sommen, Matthias Beyens, Geert Vandeweyer, Isabelle Schrauwen, Anne Schepers, Isabelle Schatteman, Vedat Topsakal, Ingeborg Dhooge, Henricus Kunst and 5 more

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular genetics and genomics : MGG, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 14 citations in OpenAlex.

  1. Pooled it
  2. Exploring the genetic landscape of otosclerosis: current understanding and future perspectives.Acta otorhinolaryngologica Italica : organo ufficiale della Societa italiana di otorinolaringologia e chirurgia cervico-facciale · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 5 countries.

Hanne ValgaerenCenter of Medical Genetics, University of Antwerp and Antwerp University Hospital, Universiteitsplein 1, Wilrijk, 2610, Antwerp, Belgium.ORCID http://orcid.org/0000-0002-8551-6270
Manou SommenCenter of Medical Genetics, University of Antwerp and Antwerp University Hospital, Universiteitsplein 1, Wilrijk, 2610, Antwerp, Belgium.ORCID http://orcid.org/0000-0001-7051-6553
Matthias BeyensCenter of Medical Genetics, University of Antwerp and Antwerp University Hospital, Universiteitsplein 1, Wilrijk, 2610, Antwerp, Belgium.ORCID http://orcid.org/0000-0003-3304-0706
Geert VandeweyerCenter of Medical Genetics, University of Antwerp and Antwerp University Hospital, Universiteitsplein 1, Wilrijk, 2610, Antwerp, Belgium.ORCID http://orcid.org/0000-0002-6262-6522
Isabelle SchrauwenMolecular and Human Genetics Department, Center for Statistical Genetics, Baylor College of Medicine, Houston, TX, USA.ORCID http://orcid.org/0000-0001-7310-6082
Anne SchepersCenter of Medical Genetics, University of Antwerp and Antwerp University Hospital, Universiteitsplein 1, Wilrijk, 2610, Antwerp, Belgium.
Isabelle SchattemanEuropean Institute for ORL, St-Augustinus Hospital Antwerp, Antwerp, Belgium.
Vedat TopsakalDepartment of Otorhinolaryngology and Head and Neck Surgery, Antwerp University Hospital, Edegem, Belgium.ORCID http://orcid.org/0000-0003-0416-4005
Ingeborg DhoogeDepartment of Otolaryngology, Ghent University Hospital, Ghent, Belgium.ORCID http://orcid.org/0000-0002-5915-1079
Henricus KunstDepartment of Otorhinolaryngology, Hearing and Genes, Radboud University Medical Center, Nijmegen, The Netherlands.ORCID http://orcid.org/0000-0003-1162-6394
Diego ZanettiDepartment of Clinical Sciences and Community Health, Audiology Unit, University of Milan, I.R.C.C.S. Fondazione "Cà Granda", Osp.le Maggiore Policlinico, Milan, Italy.ORCID http://orcid.org/0000-0002-8116-4108
Alexander M HuberDepartment of Otorhinolaryngology, Head and Neck Surgery, University Hospital Zurich, Zurich, Switzerland.ORCID http://orcid.org/0000-0002-8888-8483
Alexander HoischenDepartment of Human Genetics, Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, Nijmegen, The Netherlands.ORCID http://orcid.org/0000-0002-8072-4476
Erik FransenCenter of Medical Genetics, University of Antwerp and Antwerp University Hospital, Universiteitsplein 1, Wilrijk, 2610, Antwerp, Belgium.ORCID http://orcid.org/0000-0001-7785-4790
Guy Van CampCenter of Medical Genetics, University of Antwerp and Antwerp University Hospital, Universiteitsplein 1, Wilrijk, 2610, Antwerp, Belgium. guy.vancamp@uantwerpen.be.ORCID http://orcid.org/0000-0001-5105-9000
University of Antwerp · BERadboud University Nijmegen · NLAntwerp University Hospital · BEBaylor College of Medicine · USGhent University Hospital · BEUniversity Hospital of Zurich · CHUniversity of Milan · IT

Funding

Agentschap voor Innovatie door Wetenschap en Technologie 131526Belgian Science Policy Office Interuniversity Attraction Poles (BELSPO-IAP) program IAP P7/43-BeMGIFonds Wetenschappelijk Onderzoek 12D1717N
6 · The paper itself

Abstract

Otosclerosis is a common form of hearing loss (HL) due to abnormal remodeling of the otic capsule. The genetic causes of otosclerosis remain largely unidentified. Only mutations in a single gene, SERPINF1, were previously published in patients with familial otosclerosis. To unravel the contribution of genetic variation in this gene to otosclerosis, this gene was re-sequenced in a large population of otosclerosis patients and controls. Resequencing of the 5' and 3' UTRs, coding regions, and exon-intron boundaries of SERPINF1 was performed in 1604 unrelated otosclerosis patients and 1538 unscreened controls, and in 62 large otosclerosis families. Our study showed no enrichment of rare variants, stratified by type, in SERPINF1 in patients versus controls. Furthermore, the c.392C > A (p.Ala131Asp) variant, previously reported as pathogenic, was identified in three patients and four controls, not replicating its pathogenic nature. We could also not find evidence for a pathogenic role in otosclerosis for 5' UTR variants in the SERPINF1-012 transcript (ENST00000573763), described as the major transcript in human stapes. Furthermore, no rare variants were identified in the otosclerosis families. This study does not support a pathogenic role for variants in SERPINF1 as a cause of otosclerosis. Therefore, the etiology of the disease remains largely unknown and will undoubtedly be the focus of future studies.

Indexed as

3' Untranslated Regions5' Untranslated RegionsCase-Control StudiesEye ProteinsFemaleHumansMaleNerve Growth FactorsOtosclerosisPedigreePigment Epithelium-Derived FactorSequence Analysis, DNASerpins3' Untranslated Regions5' Untranslated RegionsEye ProteinsNerve Growth FactorsPigment Epithelium-Derived FactorSerpinsOtosclerosisResequencingSERPINF1Single molecule-molecular inversion probes

Identifiers

PMID30968248
OpenAlexW2938595346

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.