Evidence map›Paper›PMID 30968200›Full record

ArticlePlant cell reports2019

Arabidopsis GIGANTEA negatively regulates chloroplast biogenesis and resistance to herbicide butafenacil.

Joon-Yung Cha, Da-Yeon Lee, Imdad Ali, Song Yi Jeong, Bobae Shin, Hyunjung Ji, Jung Sun Kim, Min-Gab Kim, Woe-Yeon Kim

Abstract read
PubMed Publisher
In one paragraph

Article in Plant cell reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 25 citations in OpenAlex.

  1. Genes · 2024
    Review
  2. Article
  3. Article
  4. TheGenes · 2021
    Article
  5. Review
  6. Article
  7. Population Genomic Approaches for Weed Science.Plants (Basel, Switzerland) · 2019
    Review
  8. Plastid biogenesis and homeostasis.Plant cell reports · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Joon-Yung ChaDivision of Applied Life Science (BK21Plus), Plant Molecular Biology and Biotechnology Research Center (PMBBRC), Institute of Agricultural and Life Science (IALS), Gyeongsang National University, Jinju, 52828, Republic of Korea.
Da-Yeon LeeDivision of Applied Life Science (BK21Plus), Plant Molecular Biology and Biotechnology Research Center (PMBBRC), Institute of Agricultural and Life Science (IALS), Gyeongsang National University, Jinju, 52828, Republic of Korea.
Imdad AliDivision of Applied Life Science (BK21Plus), Plant Molecular Biology and Biotechnology Research Center (PMBBRC), Institute of Agricultural and Life Science (IALS), Gyeongsang National University, Jinju, 52828, Republic of Korea.
Song Yi JeongDivision of Applied Life Science (BK21Plus), Plant Molecular Biology and Biotechnology Research Center (PMBBRC), Institute of Agricultural and Life Science (IALS), Gyeongsang National University, Jinju, 52828, Republic of Korea.
Bobae ShinDepartment of Agricultural Chemistry and Food Science and Technology, Gyeongsang National University, Jinju, 52828, Republic of Korea.
Hyunjung JiDepartment of Agricultural Chemistry and Food Science and Technology, Gyeongsang National University, Jinju, 52828, Republic of Korea.
Jung Sun KimDepartment of Agricultural Biotechnology, National Institute of Agricultural Sciences, Rural Development Administration, Jeonju, 54874, Republic of Korea.
Min-Gab KimCollege of Pharmacy and Research Institute of Pharmaceutical Science, PMBBRC, Gyeongsang National University, Jinju, 52828, Republic of Korea.
Woe-Yeon KimDivision of Applied Life Science (BK21Plus), Plant Molecular Biology and Biotechnology Research Center (PMBBRC), Institute of Agricultural and Life Science (IALS), Gyeongsang National University, Jinju, 52828, Republic of Korea. kim1312@gnu.ac.kr.ORCID http://orcid.org/0000-0001-9967-5929
Gyeongsang National University · KRRural Development Administration · KR

Funding

National Research Foundation of Korea 2017R1A4A1015515Rural Development Administration PJ010953042019
6 · The paper itself

Abstract

key messageArabidopsis GI negatively regulates chloroplast biogenesis and resistance to the herbicide butafenacil by enhanced activity and transcriptional levels of antioxidant enzymes Chloroplast biogenesis is blocked by retrograde signaling triggered by diverse internal and external cues, including sugar, reactive oxygen species (ROS), phytohormones, and abiotic stress. Efficient chloroplast biogenesis is essential for crop productivity due to its effect on photosynthetic efficiency, and is associated with agronomic traits such as insect/disease resistance, herbicide resistance, and abiotic stress tolerance. Here, we show that the circadian clock-controlled gene GIGANTEA (GI) regulates chloroplast biogenesis in Arabidopsis thaliana. The gi-2 mutant showed reduced sensitivity to the chloroplast biogenesis inhibitor lincomycin, maintaining high levels of photosynthetic proteins. By contrast, wild-type and GI-overexpressing plants were sensitive to lincomycin, with variegated leaves and reduced photosynthetic protein levels. GI is degraded by lincomycin, suggesting that GI is genetically linked to chloroplast biogenesis. The GI mutant alleles gi-1 and gi-2 were resistant to the herbicide butafenacil, which inhibits protoporphyrinogen IX oxidase activity and triggers ROS-mediated cell death via the accumulation of chlorophyll precursors. Butafenacil-mediated accumulation of superoxide anions and H

Indexed as

ArabidopsisArabidopsis ProteinsChloroplastsGene Expression Regulation, PlantHerbicidesHydrocarbons, FluorinatedHydrogen PeroxidePyrimidinesSuperoxidesArabidopsis ProteinsbutafenacilGI protein, ArabidopsisHerbicidesHydrocarbons, FluorinatedHydrogen PeroxidePyrimidinesSuperoxidesButafenacilChloroplast biogenesisGIGANTEAHerbicide resistancePPORetrograde signaling

Identifiers

PMID30968200
OpenAlexW2938034342

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.