Evidence map›Paper›PMID 30967583›Full record

ArticleScientific reports2019

GCR1 and GPA1 coupling regulates nitrate, cell wall, immunity and light responses in Arabidopsis.

Navjyoti Chakraborty, Kostya Kanyuka, Dinesh Kumar Jaiswal, Abhineet Kumar, Vivek Arora, Aakansha Malik, Neha Gupta, Richard Hooley, Nandula Raghuram

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
4.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. Article
  3. Is GCR1 the GPR157 of plants?Plant physiology · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Novel Aspects of Nitrate Regulation inFrontiers in plant science · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Navjyoti ChakrabortyUniversity School of Biotechnology, G.G.S. Indraprastha University, Sector 16C, Dwarka, New Delhi, 110078, India.ORCID http://orcid.org/0000-0003-4782-1650
Kostya KanyukaBiointeractions and Crop Protection Department, Rothamsted Research, Harpenden, Hertfordshire, AL5 2JQ, UK.ORCID http://orcid.org/0000-0001-6324-4123
Dinesh Kumar JaiswalUniversity School of Biotechnology, G.G.S. Indraprastha University, Sector 16C, Dwarka, New Delhi, 110078, India.
Abhineet KumarUniversity School of Biotechnology, G.G.S. Indraprastha University, Sector 16C, Dwarka, New Delhi, 110078, India.
Vivek AroraUniversity School of Biotechnology, G.G.S. Indraprastha University, Sector 16C, Dwarka, New Delhi, 110078, India.
Aakansha MalikUniversity School of Biotechnology, G.G.S. Indraprastha University, Sector 16C, Dwarka, New Delhi, 110078, India.
Neha GuptaUniversity School of Biotechnology, G.G.S. Indraprastha University, Sector 16C, Dwarka, New Delhi, 110078, India.
Richard HooleyDepartment of Biology and Biochemistry, University of Bath, Claverton Down, Bath, BA2 7AY, UK.
Nandula RaghuramUniversity School of Biotechnology, G.G.S. Indraprastha University, Sector 16C, Dwarka, New Delhi, 110078, India. raghuram@ipu.ac.in.
Guru Gobind Singh Indraprastha University · INRothamsted Research · GBUniversity of Bath · GB

Funding

Biotechnology and Biological Sciences Research Council BB/P016855/1
6 · The paper itself

Abstract

G-protein signaling components have been attributed many biological roles in plants, but the extent of involvement of G-protein coupled receptor 1 (GCR1) with the Gα (GPA1) remained unknown. To address this, we have performed transcriptomic analyses on Arabidopsis gpa1-5gcr1-5 double mutant and identified 656 differentially expressed genes (DEGs). MapMan and Gene Ontology analyses revealed global transcriptional changes associated with external stimulus, cell wall organization/biogenesis and secondary metabolite process among others. Comparative transcriptomic analyses using the single and double mutants of gcr1-5 and gpa1-5 identified 194, 139 and 391 exclusive DEGs respectively, whereas 64 DEGs were common to all three mutants. Further, pair wise comparison of DEGs of double mutant with single mutants of gcr1-5 or gpa1-5 showed about one-third and over half common DEGs, respectively. Further analysis of the DEGs exclusive to the double mutant using protein-protein interaction networks revealed molecular complexes associated with nitrate and light signaling and plant-pathogen interactions among others. Physiological and molecular validation of nitrate-response revealed the sensitivity of germination to low N in the double mutant and differential expression of nitrate transporter (and nitrate reductase in all three mutants). Taken together, GCR1 and GPA1 work in partnership as well as independently to regulate different pathways.

Indexed as

Gene Expression Regulation, PlantArabidopsisArabidopsis ProteinsCell WallGerminationGTP-Binding Protein alpha SubunitsNitratesReceptors, G-Protein-CoupledArabidopsis ProteinsGCR1 protein, ArabidopsisGPA1 protein, ArabidopsisGTP-Binding Protein alpha SubunitsNitratesReceptors, G-Protein-Coupled

Identifiers

PMID30967583
PMCPMC6456573
OpenAlexW2936677078

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.