Evidence map›Paper›PMID 30967555›Full record

ArticleScientific data2019

Phospho serine and threonine analysis of normal and mutated granulocyte colony stimulating factor receptors.

Pankaj Dwivedi, David E Muench, Michael Wagner, Mohammad Azam, H Leighton Grimes, Kenneth D Greis

Open access · goldAbstract readDataset
In one paragraph

Article in Scientific data, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 4 pooled it
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 4 syntheses or guidelines pooled it, 32 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Purification and membrane interactions of human KCNQ1Biochimica et biophysica acta. Biomembranes · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Pankaj DwivediDepartment of Cancer Biology, University of Cincinnati, Cincinnati, Ohio, 45267, USA.ORCID http://orcid.org/0000-0002-7666-9216
David E MuenchDivision of Immunobiology and Center for Systems Immunology, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, USA.ORCID http://orcid.org/0000-0002-8723-3389
Michael WagnerDivision of Biomedical Informatics, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, USA.
Mohammad AzamDivision of Experimental Hematology and Cancer Biology, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, USA.
H Leighton GrimesDivision of Immunobiology and Center for Systems Immunology, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, USA.ORCID http://orcid.org/0000-0001-8162-6758
Kenneth D GreisDepartment of Cancer Biology, University of Cincinnati, Cincinnati, Ohio, 45267, USA. ken.greis@uc.edu.ORCID http://orcid.org/0000-0002-5316-3351
Cincinnati Children's Hospital Medical Center · USUniversity of Cincinnati · US

Funding

ENVIRONMETAL CARCINOGENESIS AND MUTAGENESIST32ES007250 · NIEHS · UNIVERSITY OF CINCINNATI · PI MILLER, WILLIAM E · 1988 to 2024
$11.9M
A rapid spontaneous murine model of CN-AMLR01CA196658 · NCI · CINCINNATI CHILDRENS HOSP MED CTR · PI GRIMES, H. LEIGHTON · 2016 to 2018
$2.2M
Mechanism of non-oncogene addictionR01CA211594 · NCI · CINCINNATI CHILDRENS HOSP MED CTR · PI AZAM, MOHAMMAD · 2018 to 2022
$1.8M
Improved therapeutic approaches for hematological disorder treated with tyrosineR01CA155091 · NCI · CINCINNATI CHILDRENS HOSP MED CTR · PI AZAM, MOHAMMAD · 2012 to 2016
$1.6M
Enhanced proteomics capabilities for quantitation of proteins with a triple quadS10RR027015 · NCRR · UNIVERSITY OF CINCINNATI · PI GREIS, KENNETH DONALD · 2010 to 2010
$426k
NCI NIH HHS R01 CA155091NCI NIH HHS R01 CA196658NCI NIH HHS R01 CA211594NCRR NIH HHS S10 RR027015NIEHS NIH HHS T32 ES007250
6 · The paper itself

Abstract

Granulocyte colony stimulating factor receptor (G-CSFR) plays an important role in the production of neutrophil granulocytes. Mutated G-CSFRs have been directly associated with two distinct malignant phenotypes in patients, e.g. acute myeloid leukemia (AML) and chronic neutrophilic leukemia (CNL). However, the signaling mechanism of the mutated G-CSFRs is not well understood. Here, we present a comprehensive SILAC-based quantitative phosphoserine and phosphothreonine dataset of the normal and mutated G-CSFRs signaling using the BaF3 cell-line-based in vitro model system. High pH reversed phase concatenation and Titanium Dioxide Spin Tip column were utilized to increase the dynamic range and detection of the phosphoproteome of G-CSFRs. The dataset was further analyzed using several computational tools to validate the quality of the dataset. Overall, this dataset is the first global phosphoproteomics analysis of both normal and disease-associated-mutant G-CSFRs. We anticipate that this dataset will have a strong potential to decipher the phospho-signaling differences between the normal and malignant G-CSFR biology with therapeutic implications. The phosphoproteomic dataset is available via the PRIDE partner repository.

Indexed as

Receptors, Granulocyte Colony-Stimulating FactorSerineThreonineAnimalsCell Line, TumorMiceMutationPhosphoserinePhosphothreonineSignal TransductionPhosphoserinePhosphothreonineReceptors, Granulocyte Colony-Stimulating FactorSerineThreonine

Identifiers

PMID30967555
PMCPMC6480977
OpenAlexW2938630221

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.