Evidence map›Paper›PMID 30965565›Full record

ArticleViruses2019

Codon Usage Bias Analysis of

Kajal Kumar Biswas, Supratik Palchoudhury, Prosenjit Chakraborty, Utpal K Bhattacharyya, Dilip K Ghosh, Palash Debnath, Chandrika Ramadugu, Manjunath L Keremane, Ravi K Khetarpal, Richard F Lee

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
7.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Over time analysis of the codon usage of SARS-CoV-2 and its variants.Computational and structural biotechnology journal · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Composition and Codon Usage Pattern Results in Divergence of theJournal of fungi (Basel, Switzerland) · 2022
    Article
  15. Article
  16. Article
  17. Article
  18. Analysis of codon usage patterns in open reading frame 4 of hepatitis E viruses.Beni-Suef University journal of basic and applied sciences · 2022
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Kajal Kumar BiswasAdvanced Centre for Plant Virology, Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi 11012, India. drkkbiswas@yahoo.co.in.
Supratik PalchoudhuryAdvanced Centre for Plant Virology, Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi 11012, India. supratik88pc@gmail.com.
Prosenjit ChakrabortyAdvanced Centre for Plant Virology, Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi 11012, India. nbu.prosen@yahoo.in.ORCID 0000-0002-2435-9582
Utpal K BhattacharyyaAdvanced Centre for Plant Virology, Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi 11012, India. ukbhatta2@gmail.com.
Dilip K GhoshICAR-Central Citrus Research Institute, Nagpur 440033, India. ghoshdk@hotmail.com.
Palash DebnathDepartment of Plant Pathology, Assam Agricultural University, Jorhat 785013, India. pnath1@rediffmail.com.
Chandrika RamaduguDepartment of Botany and Plant Sciences, University of California, Riverside, CA 92507, USA. chandrika.ramadugu@ucr.edu.
Manjunath L KeremaneNational Clonal Germplasm Repository for Citrus & Dates, United States Department of Agriculture-Agricultural Research Service, Riverside, CA 92507, USA. Manjunath.keremane@ars.usda.gov.
Ravi K KhetarpalAsia-Pacific Association of Agricultural Research Institutions, Bangkok 10100, Thailand. ravi.khetarpal@apaari.org.
Richard F LeeNational Clonal Germplasm Repository for Citrus & Dates, United States Department of Agriculture-Agricultural Research Service, Riverside, CA 92507, USA. rfleevirus@yahoo.com.
Indian Agricultural Research Institute · INAgricultural Research Service · USAssam Agricultural University · INCentral Citrus Research Institute · INUniversity of California, Riverside · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Adaptation, BiologicalCodon UsageCapsid ProteinsCitrusCitrus aurantiifoliaCitrus sinensisClosterovirusGenomic InstabilityRNA, ViralCapsid ProteinsRNA, Viralcitrus hostCitrus tristeza viruscodon usage adaptationcodon usage biashigh-frequency codonsnatural selection

Identifiers

PMID30965565
PMCPMC6521185
OpenAlexW2934572055

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.