Evidence map›Paper›PMID 30963893›Full record

ArticleProceedings. Biological sciences2018

Clonal evolution and genome stability in a 2500-year-old fungal individual.

James B Anderson, Johann N Bruhn, Dahlia Kasimer, Hao Wang, Nicolas Rodrigue, Myron L Smith

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings. Biological sciences, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
10.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
  2. Article
  3. Mosaic of somatic mutations in one of Earth's largest organisms, Pando.bioRxiv : the preprint server for biology · 2025
    Article
  4. Review
  5. Emergence of synchronized growth oscillations in filamentous fungi.Journal of the Royal Society, Interface · 2024
    Article
  6. Review
  7. Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Stage-specific transposon activity in the life cycle of the fairy-ring mushroomProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

James B Anderson1 Department of Biology, University of Toronto , Mississauga, Ontario, Canada L5 L 1C6.
Johann N Bruhn2 Division of Plant Sciences, University of Missouri , Columbia, MO 65211, USA.
Dahlia Kasimer1 Department of Biology, University of Toronto , Mississauga, Ontario, Canada L5 L 1C6.
Hao Wang3 Department of Biology, Carleton University , Ottawa, Ontario, Canada K1S 5B6.
Nicolas Rodrigue3 Department of Biology, Carleton University , Ottawa, Ontario, Canada K1S 5B6.
Myron L Smith3 Department of Biology, Carleton University , Ottawa, Ontario, Canada K1S 5B6.
Carleton University · CAUniversity of Toronto · CAUniversity of Missouri · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Individuals of the basidiomycete fungus Armillaria are well known for their ability to spread from woody substrate to substrate on the forest floor through the growth of rhizomorphs. Here, we made 248 collections of A. gallica in one locality in Michigan's Upper Peninsula. To identify individuals, we genotyped collections with molecular markers and somatic compatibility testing. We found several different individuals in proximity to one another, but one genetic individual stood out as exceptionally large, covering hundreds of tree root systems over approximately 75 hectares of the forest floor. Based on observed growth rates of the fungus, we estimate the minimum age of the large individual as 2500 years. With whole-genome sequencing and variant discovery, we also found that mutation had occurred within the somatic cells of the individual, reflecting its historical pattern of growth from a single point. The overall rate of mutation over the 90 mb genome, however, was extremely low. This same individual was first discovered in the late 1980s, but its full spatial extent and internal mutation dynamic was unknown at that time. The large individual of A. gallica has been remarkably resistant to genomic change as it has persisted in place.

Indexed as

Clonal EvolutionGenomic InstabilityGenotypeArmillariaDNA, FungalMichiganMutationDNA, FungalArmillariagenome stabilitymutationsingle-nucleotide polymorphism

Identifiers

PMID30963893
PMCPMC6304041
OpenAlexW2951143673

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.