Evidence map›Paper›PMID 30962508›Full record

ArticleScientific reports2019

Changing surface grafting density has an effect on the activity of immobilized xylanase towards natural polysaccharides.

Cédric Y Montanier, Mathieu Fanuel, Hélène Rogniaux, David Ropartz, Anne-Marie Di Guilmi, Antoine Bouchoux

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Cédric Y MontanierLISBP, Université de Toulouse, CNRS, INRA, INSA, Toulouse, France. cedric.montanier@insa-toulouse.fr.ORCID http://orcid.org/0000-0002-8205-7160
Mathieu FanuelINRA, UR1268 Biopolymers Interactions Assemblies, F-44316, Nantes, France.
Hélène RogniauxINRA, UR1268 Biopolymers Interactions Assemblies, F-44316, Nantes, France.
David RopartzINRA, UR1268 Biopolymers Interactions Assemblies, F-44316, Nantes, France.ORCID http://orcid.org/0000-0003-4767-6940
Anne-Marie Di GuilmiCEA, 18 route du panorama, 92265, Fontenay-aux-roses, France.
Antoine BouchouxLISBP, Université de Toulouse, CNRS, INRA, INSA, Toulouse, France.ORCID http://orcid.org/0000-0001-5562-3676
Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement · FRCentre National de la Recherche Scientifique · FRCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Enzymes are involved in various types of biological processes. In many cases, they are part of multi-component machineries where enzymes are localized in close proximity to each-other. In such situations, it is still not clear whether inter-enzyme spacing actually plays a role or if the colocalization of complementary activities is sufficient to explain the efficiency of the system. Here, we focus on the effect of spatial proximity when identical enzymes are immobilized onto a surface. By using an innovative grafting procedure based on the use of two engineered protein fragments, Jo and In, we produce model systems in which enzymes are immobilized at surface densities that can be controlled precisely. The enzyme used is a xylanase that participates to the hydrolysis of plant cell wall polymers. By using a small chromogenic substrate, we first show that the intrinsic activity of the enzymes is fully preserved upon immobilization and does not depend on surface density. However, when using beechwood xylan, a naturally occurring polysaccharide, as substrate, we find that the enzymatic efficiency decreases by 10-60% with the density of grafting. This unexpected result is probably explained through steric hindrance effects at the nanoscale that hinder proper interaction between the enzymes and the polymer. A second effect of enzyme immobilization at high densities is the clear tendency for the system to release preferentially shorter oligosaccharides from beechwood xylan as compared to enzymes in solution.

Indexed as

Cell WallEndo-1,4-beta XylanasesEnzymes, ImmobilizedFungal ProteinsHydrolysisNeocallimastixPolysaccharidesSubstrate SpecificityWoodEndo-1,4-beta XylanasesEnzymes, ImmobilizedFungal ProteinsPolysaccharides

Identifiers

PMID30962508
PMCPMC6453946
OpenAlexW2931251970

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.