Evidence map›Paper›PMID 30962276›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2019

The Spinal Transcriptome after Cortical Stroke: In Search of Molecular Factors Regulating Spontaneous Recovery in the Spinal Cord.

Julia Kaiser, Martina Maibach, Iris Salpeter, Niels Hagenbuch, Vladimir B C de Souza, Mark D Robinson, Martin E Schwab

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
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  6. Modified human mesenchymal stromal/stem cells restore cortical excitability after focal ischemic stroke in rats.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Article
  7. Spastic Paresis: A Treatable Movement Disorder.Movement disorders : official journal of the Movement Disorder Society · 2025
    Article
  8. Review
  9. Brain repair mechanisms after cell therapy for stroke.Brain : a journal of neurology · 2024
    Review
  10. Spinal Cord Stimulation for Poststroke Hemiparesis: A Scoping Review.The American journal of occupational therapy : official publication of the American Occupational Therapy Association · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Involvement of Denervated Midbrain-Derived Factors in the Formation of Ectopic Cortico-Mesencephalic Projection after Hemispherectomy.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2022
    Article
  17. Article
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  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Julia KaiserBrain Research Institute and Department of Health Sciences and Technology, University and ETH Zurich, 8057, Zurich, Switzerland, kaiser@irem.uzh.ch.ORCID 0000-0001-5142-6050
Martina MaibachBrain Research Institute and Department of Health Sciences and Technology, University and ETH Zurich, 8057, Zurich, Switzerland.
Iris SalpeterBrain Research Institute and Department of Health Sciences and Technology, University and ETH Zurich, 8057, Zurich, Switzerland.
Niels HagenbuchInstitute for Epidemiology, Biostatistics, and Prevention, Department of Biostatistics, University of Zurich, 8001, Zurich, Switzerland, and.ORCID 0000-0002-5473-075X
Vladimir B C de SouzaDepartment of Molecular Life Sciences and SIB Swiss Institute of Bioinformatics, University of Zurich, 8052, Zurich, Switzerland.
Mark D RobinsonDepartment of Molecular Life Sciences and SIB Swiss Institute of Bioinformatics, University of Zurich, 8052, Zurich, Switzerland.ORCID 0000-0002-3048-5518
Martin E SchwabBrain Research Institute and Department of Health Sciences and Technology, University and ETH Zurich, 8057, Zurich, Switzerland.
ETH Zurich · CHSIB Swiss Institute of Bioinformatics · CHUniversity of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In response to cortical stroke and unilateral corticospinal tract degeneration, compensatory sprouting of spared corticospinal fibers is associated with recovery of skilled movement in rodents. To date, little is known about the molecular mechanisms orchestrating this spontaneous rewiring. In this study, we provide insights into the molecular changes in the spinal cord tissue after large ischemic cortical injury in adult female mice, with a focus on factors that might influence the reinnervation process by contralesional corticospinal neurons. We mapped the area of cervical gray matter reinnervation by sprouting contralesional corticospinal axons after unilateral photothrombotic stroke of the motor cortex in mice using anterograde tracing. The mRNA profile of this reinnervation area was analyzed using whole-genome sequencing to identify differentially expressed genes at selected time points during the recovery process. Bioinformatic analysis revealed two phases of processes: early after stroke (4-7 d post-injury), the spinal transcriptome is characterized by inflammatory processes, including phagocytic processes as well as complement cascade activation. Microglia are specifically activated in the denervated corticospinal projection fields in this early phase. In a later phase (28-42 d post-injury), biological processes include tissue repair pathways with upregulated genes related to neurite outgrowth. Thus, the stroke-denervated spinal gray matter, in particular its intermediate laminae, represents a growth-promoting environment for sprouting corticospinal fibers originating from the contralesional motor cortex. This dataset provides a solid starting point for future studies addressing key elements of the post-stroke recovery process, with the goal to improve neuroregenerative treatment options for stroke patients.

Indexed as

TranscriptomeAnimalsCerebral CortexComputational BiologyFemaleGene Expression RegulationGray MatterInflammationMacrophage ActivationMaleMiceMice, Inbred C57BLMotor CortexNerve RegenerationPhagocytesPyramidal TractsRNA, Messengerplasticityrecoveryregenerationspinal cordstroketranscriptome

Identifiers

PMID30962276
PMCPMC6561692
OpenAlexW2936913577

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.