Evidence map›Paper›PMID 30961541›Full record

ArticleBMC plant biology2019

Identification of candidate genes responsible for the susceptibility of apple (Malus × domestica Borkh.) to Alternaria blotch.

Shigeki Moriya, Shingo Terakami, Kazuma Okada, Taku Shimizu, Yoshihiko Adachi, Yuichi Katayose, Hiroko Fujisawa, Jianzhon Wu, Hiroyuki Kanamori, Toshiya Yamamoto and 1 more

Abstract read
In one paragraph

Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Plants (Basel, Switzerland) · 2022
    Article
  5. Insertion of a TRIM-like sequence inFrontiers in plant science · 2022
    Article
  6. Article
  7. Article
  8. Article
  9. Characterization ofInternational journal of molecular sciences · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Shigeki MoriyaApple Research Station, Institute of Fruit Tree and Tea Science, National Agriculture and Food Research Organization (NARO), 92-24 Shimokuriyagawa Nabeyashiki, Morioka, Iwate, 020-0123, Japan. moriyas@affrc.go.jp.
Shingo TerakamiInstitute of Fruit Tree and Tea Science, NARO, 2-1 Fujimoto, Tsukuba, Ibaraki, 305-8604, Japan.
Kazuma OkadaApple Research Station, Institute of Fruit Tree and Tea Science, National Agriculture and Food Research Organization (NARO), 92-24 Shimokuriyagawa Nabeyashiki, Morioka, Iwate, 020-0123, Japan.
Taku ShimizuApple Research Station, Institute of Fruit Tree and Tea Science, National Agriculture and Food Research Organization (NARO), 92-24 Shimokuriyagawa Nabeyashiki, Morioka, Iwate, 020-0123, Japan.
Yoshihiko AdachiCitrus Research Station, Institute of Fruit Tree and Tea Science, NARO, 485-6 Okitsunaka-cho, Shimizu, Shizuoka City, Shizuoka, 424-0284, Japan.
Yuichi KatayoseAdvanced Genomics Breeding Section, Institute of Crop Science, NARO, 1-2 Ohwashi, Tsukuba, Ibaraki, 305-8634, Japan.
Hiroko FujisawaAdvanced Genomics Breeding Section, Institute of Crop Science, NARO, 1-2 Ohwashi, Tsukuba, Ibaraki, 305-8634, Japan.
Jianzhon WuAdvanced Genomics Breeding Section, Institute of Crop Science, NARO, 1-2 Ohwashi, Tsukuba, Ibaraki, 305-8634, Japan.
Hiroyuki KanamoriAdvanced Genomics Breeding Section, Institute of Crop Science, NARO, 1-2 Ohwashi, Tsukuba, Ibaraki, 305-8634, Japan.
Toshiya YamamotoInstitute of Fruit Tree and Tea Science, NARO, 2-1 Fujimoto, Tsukuba, Ibaraki, 305-8604, Japan.
Kazuyuki AbeApple Research Station, Institute of Fruit Tree and Tea Science, National Agriculture and Food Research Organization (NARO), 92-24 Shimokuriyagawa Nabeyashiki, Morioka, Iwate, 020-0123, Japan.

Funding

Ministry of Agriculture, Forestry and Fisheries HOR2001
6 · The paper itself

Abstract

backgroundThe mechanism underlying the interaction between host plant and host-selective toxin (HST)-producing Alternaria alternata during infection is of particular interest for sustainable crop production. Alternaria blotch of apple (Malus × domestica Borkh.) caused by A. alternata apple pathotype is a major disease particularly in East Asia, which is the largest producer of apples globally. A single dominant gene, Alt, controls the susceptibility of the apple cultivar 'Delicious' to Alternaria blotch. In this study, we fine mapped the Alt locus and characterized three potential candidate genes.

resultsWe used 797 F

conclusionA disease resistance protein has been suggested as a determinant of susceptibility/resistance to HST-producing A. alternata for the first time. Our finding provides new insight into the mechanism of HST-mediated disease control used by A. alternata against host plants.

Indexed as

AlternariaDisease ResistanceGene LibraryLeucine-Rich Repeat ProteinsMalusPlant DiseasesPlant ProteinsProteinsLeucine-Rich Repeat ProteinsPlant ProteinsProteinsAlternaria alternataBacterial artificial chromosome libraryDisease resistanceGuard modelHost-selective toxin

Identifiers

PMID30961541
PMCPMC6454750

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.