Evidence map›Paper›PMID 30958470›Full record

ArticleJournal of visualized experiments : JoVE2019

Characterizing Histone Post-translational Modification Alterations in Yeast Neurodegenerative Proteinopathy Models.

Seth A Bennett, Samantha N Cobos, Marcella Meykler, Michel Fallah, Navin Rana, Karen Chen, Mariana P Torrente

Abstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. ACS omega · 2025
    Article
  3. Article
  4. Article
  5. [PRIONPathogens (Basel, Switzerland) · 2022
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Seth A BennettChemistry Department, Brooklyn College; Ph.D. Program in Biochemistry, Graduate Center of the City University of New York.
Samantha N CobosChemistry Department, Brooklyn College; Ph.D. Program in Chemistry, Graduate Center of the City University of New York.
Marcella MeyklerChemistry Department, Brooklyn College.
Michel FallahChemistry Department, Brooklyn College.
Navin RanaChemistry Department, Brooklyn College.
Karen ChenChemistry Department, Brooklyn College.
Mariana P TorrenteChemistry Department, Brooklyn College; Ph.D. Programs in Chemistry, Biochemistry, and Biology, Graduate Center of the City University of New York; mariana.torrente@brooklyn.cuny.edu.

Funding

Epigenetics In Neurodegenerative Disease: Targeting Histone Modifications in ALSK22NS091314 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI TORRENTE, MARIANA PLAZAS · 2015 to 2017
$536k
NINDS NIH HHS K22 NS091314
6 · The paper itself

Abstract

Neurodegenerative diseases, such as amyotrophic lateral sclerosis (ALS) and Parkinson's disease (PD), cause the loss of hundreds of thousands of lives each year. Effective treatment options able to halt disease progression are lacking. Despite the extensive sequencing efforts in large patient populations, the majority of ALS and PD cases remain unexplained by genetic mutations alone. Epigenetics mechanisms, such as the post-translational modification of histone proteins, may be involved in neurodegenerative disease etiology and progression and lead to new targets for pharmaceutical intervention. Mammalian in vivo and in vitro models of ALS and PD are costly and often require prolonged and laborious experimental protocols. Here, we outline a practical, fast, and cost-effective approach to determining genome-wide alterations in histone modification levels using Saccharomyces cerevisiae as a model system. This protocol allows for comprehensive investigations into epigenetic changes connected to neurodegenerative proteinopathies that corroborate previous findings in different model systems while significantly expanding our knowledge of the neurodegenerative disease epigenome.

Indexed as

GenomicsProtein Processing, Post-TranslationalSaccharomyces cerevisiaeDisease ProgressionEpigenesis, GeneticHistonesNeurodegenerative DiseasesHistones

Identifiers

PMID30958470
PMCPMC6543847

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.