Evidence map›Paper›PMID 30957824›Full record

ArticleChemical communications (Cambridge, England)2019

Synthesis and application of the blue fluorescent amino acid l-4-cyanotryptophan to assess peptide-membrane interactions.

Kui Zhang, Ismail A Ahmed, Huong T Kratochvil, William F DeGrado, Feng Gai, Hyunil Jo

Abstract read
In one paragraph

Article in Chemical communications (Cambridge, England), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Light-Emitting Probes for Labeling Peptides.Cell reports. Physical science · 2020
    Article
  11. Review
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Kui ZhangDepartment of Pharmaceutical Chemistry, University of California, San Francisco, CA 94158, USA. hyunil.jo@ucsf.edu.
Ismail A Ahmed
Huong T Kratochvil
William F DeGrado
Feng Gai
Hyunil Jo

Funding

Deciphering the relationship between structure, dynamics and function in helical bundle proteinsR35GM122603 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WILLIAM DEGRADO · 2017 to 2026
$7.1M
A Multiscale Model of Protein Mediated Changes in membrane MorphologyR01GM117593 · NIGMS · COLORADO STATE UNIVERSITY · PI ZHOU, YONGCHENG · 2015 to 2019
$1.8M
A structural and biophysical study of the matrix proteins in influenza A/B viruses: Mechanisms of proton conduction and roles of protein-protein interactionsF32GM125217 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KRATOCHVIL, HUONG TRAN · 2017 to 2019
$177k
Interrogating Early Tau Aggregation Using Unnatural Amino Acid Spectroscopic ProbesF99NS108544 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI AHMED, ISMAIL A. · 2018 to 2018
$30k
NIGMS NIH HHS F32 GM125217NIGMS NIH HHS R01 GM117593NIGMS NIH HHS R35 GM122603NINDS NIH HHS F99 NS108544
6 · The paper itself

Abstract

Recently, l-4-cyanotryptophan has been shown to be an efficient blue fluorescence emitter, with the potential to enable novel applications in biological spectroscopy and microscopy. However, lack of facile synthetic routes to this unnatural amino acid limits its wide use. Herein, we describe an expedient approach to synthesize Fmoc protected l-4-cyanotryptophan with high optical purity (>99%). Additionally, we test the utility of this blue fluorophore in imaging cell-membrane-bound peptides and in determining peptide-membrane binding constants.

Indexed as

Amino Acid SequenceCell MembraneFluorescenceFluorescence Resonance Energy TransferFluorescent DyesHeLa CellsHumansMembrane ProteinsMicroscopy, FluorescencePhosphatidylcholinesProtein BindingTryptophanUnilamellar Liposomes1-palmitoyl-2-oleoylphosphatidylcholineFluorescent DyesMembrane ProteinspHLIP proteinPhosphatidylcholinesTryptophanUnilamellar Liposomes

Identifiers

PMID30957824
PMCPMC6508085

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.