Evidence map›Paper›PMID 30956008›Full record

ArticleDevelopmental cell2019

The Long Non-Coding RNA lep-5 Promotes the Juvenile-to-Adult Transition by Destabilizing LIN-28.

Karin C Kiontke, R Antonio Herrera, Edward Vuong, Jintao Luo, Erich M Schwarz, David H A Fitch, Douglas S Portman

Open access · bronzeAbstract read
In one paragraph

Article in Developmental cell, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
0.8field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. A gene expression atlas of a juvenile nervous system.bioRxiv : the preprint server for biology · 2025
    Article
  4. Article
  5. CGC1, a new reference genome forGenome research · 2025
    Article
  6. Morphologically defined substages of tail morphogenesis in C. elegans males.Developmental dynamics : an official publication of the American Association of Anatomists · 2024
    Review
  7. Article
  8. Review
  9. Review
  10. Morphologically defined substages of tail morphogenesis inbioRxiv : the preprint server for biology · 2024
    Article
  11. Article
  12. Article
  13. Two intrinsic timing mechanisms set start and end times for dendritic arborization of a nociceptive neuron.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  14. Article
  15. Transcriptomic Data Analyses Reveal That Sow Fertility-Related lincRNAFrontiers in cell and developmental biology · 2021
    Article
  16. Review
  17. Article
  18. The MakorineLife · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Karin C KiontkeCenter for Developmental Genetics, Department of Biology, New York University, 100 Washington Square East, New York, NY 10003, USA.
R Antonio HerreraCenter for Developmental Genetics, Department of Biology, New York University, 100 Washington Square East, New York, NY 10003, USA; Department of Applied Mathematics and Statistics, Laufer Center for Physical and Quantitative Biology, Stony Brook University, Stony Brook, NY 11794-5252, USA.
Edward VuongDepartments of Biomedical Genetics and Neuroscience, University of Rochester School of Medicine and Dentistry, 601 Elmwood Avenue, Rochester, NY 14642, USA.
Jintao LuoDepartments of Biomedical Genetics and Neuroscience, University of Rochester School of Medicine and Dentistry, 601 Elmwood Avenue, Rochester, NY 14642, USA.
Erich M SchwarzDepartment of Molecular Biology and Genetics, Biotechnology 351, Cornell University, Ithaca, NY 14853-2703, USA.
David H A FitchCenter for Developmental Genetics, Department of Biology, New York University, 100 Washington Square East, New York, NY 10003, USA; Arts & Sciences, New York University Shanghai, 1555 Century Ave., Pudong New Area, Shanghai 200122, China. Electronic address: david.fitch@nyu.edu.
Douglas S PortmanDepartments of Biomedical Genetics and Neuroscience, University of Rochester School of Medicine and Dentistry, 601 Elmwood Avenue, Rochester, NY 14642, USA. Electronic address: douglas.portman@rochester.edu.
University of Rochester · USNew York University · USCornell University · USNew York University Shanghai · CN

Funding

University of Rochester Mentoring Environment: Nurturing Training Opportunities in Research (UR-MENTOR)T32GM007356 · NIGMS · UNIVERSITY OF ROCHESTER · PI O'BANION, M. KERRY · 1985 to 2023
$15.1M
IRACDA - The New York Consortium for the Advancement of Postdoctoral Scholars (NY CAPS)Phase IIK12GM102778 · NIGMS · STATE UNIVERSITY NEW YORK STONY BROOK · PI Carol A. Carter, Karian Janice Wright · 2012 to 2026
$13.1M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Architecture of a Genetic Network Governing MorphogenesisR01GM100140 · NIGMS · NEW YORK UNIVERSITY · PI FITCH, DAVID H. A. · 2012 to 2015
$1.1M
Genetic and Hormonal Mechanisms of Sex Differences in the Nervous SystemR01GM108885 · NIGMS · UNIVERSITY OF ROCHESTER · PI PORTMAN, DOUGLAS S · 2014 to 2017
$1.1M
NIGMS NIH HHS K12 GM102778NIGMS NIH HHS R01 GM100140NIGMS NIH HHS R01 GM108885NIGMS NIH HHS T32 GM007356NIH HHS P40 OD010440
6 · The paper itself

Abstract

Biological roles for most long non-coding RNAs (lncRNAs) remain mysterious. Here, using forward genetics, we identify lep-5, a lncRNA acting in the C. elegans heterochronic (developmental timing) pathway. Loss of lep-5 delays hypodermal maturation and male tail tip morphogenesis (TTM), hallmarks of the juvenile-to-adult transition. We find that lep-5 is a ∼600 nt cytoplasmic RNA that is conserved across Caenorhabditis and possesses three essential secondary structure motifs but no essential open reading frames. lep-5 expression is temporally controlled, peaking prior to TTM onset. Like the Makorin LEP-2, lep-5 facilitates the degradation of LIN-28, a conserved miRNA regulator specifying the juvenile state. Both LIN-28 and LEP-2 associate with lep-5 in vivo, suggesting that lep-5 directly regulates LIN-28 stability and may function as an RNA scaffold. These studies identify a key biological role for a lncRNA: by regulating protein stability, it provides a temporal cue to facilitate the juvenile-to-adult transition.

Indexed as

Amino Acid SequenceAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsMorphogenesisMutationPhenotypeRepressor ProteinsRibonucleoproteinsRNA, Long NoncodingTranscription FactorsCaenorhabditis elegans ProteinsLIN-28 protein, C elegansRepressor ProteinsRibonucleoproteinsRNA, Long NoncodingTranscription FactorsC. elegansdevelopmental timingheterochroniclincRNAlncRNAmale tailmorphogenesisncRNARNA scaffold

Identifiers

PMID30956008
PMCPMC6733259
OpenAlexW2929917670

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.